Gene
RNA
| Item | Value |
|---|---|
| gene id | G1717800 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 23274731 ~ 23275055 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1968066 | True | 325 | lncRNA | 0.39 | 1 | 23274731 | 23275055 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ascl1a | LOC106576285 | coding | upstream | 53966 | 23218944 ~ 23220765 (+) |
| LOC110500046 | LOC106609461 | coding | upstream | 85075 | 23164105 ~ 23189656 (+) |
| klhl42 | LOC106609448 | coding | upstream | 114058 | 23157083 ~ 23160673 (+) |
| amdhd1 | amdhd1 | coding | upstream | 169725 | 23100978 ~ 23105006 (+) |
| ruxf | LOC105021811 | coding | upstream | 173908 | 23098972 ~ 23100823 (+) |
| LOC110500049 | LOC106576281 | coding | downstream | 20728 | 23295783 ~ 23313876 (+) |
| th2 | LOC106609447 | coding | downstream | 39280 | 23314335 ~ 23327014 (+) |
| LOC110500052 | NA | coding | downstream | 66133 | 23341188 ~ 23353769 (+) |
| LOC110500056 | ccd53 | coding | downstream | 118472 | 23393527 ~ 23397736 (+) |
| LOC110500058 | LOC106576272 | coding | downstream | 130407 | 23405462 ~ 23423738 (+) |
| G1717794 | NA | non-coding | upstream | 8045 | 23266296 ~ 23266686 (+) |
| G1717792 | NA | non-coding | upstream | 12237 | 23262295 ~ 23262494 (+) |
| G1717791 | NA | non-coding | upstream | 12859 | 23261670 ~ 23261872 (+) |
| G1717790 | NA | non-coding | upstream | 13093 | 23261335 ~ 23261638 (+) |
| G1717789 | NA | non-coding | upstream | 13682 | 23260145 ~ 23261049 (+) |
| G1717822 | NA | non-coding | downstream | 54534 | 23329589 ~ 23330057 (+) |
| G1717875 | NA | non-coding | downstream | 168636 | 23443691 ~ 23444109 (+) |
| G1718589 | NA | non-coding | downstream | 211044 | 23486099 ~ 23486376 (+) |
| G1718597 | NA | non-coding | downstream | 214287 | 23489342 ~ 23489551 (+) |
| G1717785 | NA | other | upstream | 17919 | 23256126 ~ 23256812 (+) |
| LOC110500038 | LOC106609436 | other | upstream | 251967 | 23014617 ~ 23032420 (+) |
| G1717520 | NA | other | upstream | 394808 | 22820752 ~ 22879923 (+) |
| G1719225 | NA | other | downstream | 798350 | 24073405 ~ 24074448 (+) |
| G1719268 | NA | other | downstream | 860709 | 24135764 ~ 24136323 (+) |
| adm2a | LOC106609361 | other | downstream | 1002776 | 24277797 ~ 24294858 (+) |
| LOC110500097 | LOC106576231 | other | downstream | 1041583 | 24315919 ~ 24321712 (+) |
| G1720836 | NA | other | downstream | 2336761 | 25611816 ~ 25612268 (+) |
