Gene
RNA
| Item | Value |
|---|---|
| gene id | G1717875 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 23443691 ~ 23444109 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: myosin-binding protein C, slow-type-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1968145 | True | 333 | lncRNA | 0.52 | 2 | 23443691 | 23444109 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500058 | LOC106576272 | coding | upstream | 19953 | 23405462 ~ 23423738 (+) |
| LOC110500056 | ccd53 | coding | upstream | 45955 | 23393527 ~ 23397736 (+) |
| LOC110500052 | NA | coding | upstream | 89922 | 23341188 ~ 23353769 (+) |
| th2 | LOC106609447 | coding | upstream | 116677 | 23314335 ~ 23327014 (+) |
| LOC110500049 | LOC106576281 | coding | upstream | 129815 | 23295783 ~ 23313876 (+) |
| LOC110500067 | LOC106609471 | coding | downstream | 57015 | 23501124 ~ 23504811 (+) |
| ada2b | LOC106609445 | coding | downstream | 60939 | 23505048 ~ 23510558 (+) |
| LOC110500071 | LOC106609473 | coding | downstream | 170029 | 23614138 ~ 23622406 (+) |
| LOC110500073 | LOC106609463 | coding | downstream | 197281 | 23641390 ~ 23644750 (+) |
| LOC118942913 | NA | coding | downstream | 264353 | 23708462 ~ 23709161 (+) |
| G1717822 | NA | non-coding | upstream | 113634 | 23329589 ~ 23330057 (+) |
| G1717800 | NA | non-coding | upstream | 168636 | 23274731 ~ 23275055 (+) |
| G1717794 | NA | non-coding | upstream | 177005 | 23266296 ~ 23266686 (+) |
| G1717792 | NA | non-coding | upstream | 181197 | 23262295 ~ 23262494 (+) |
| G1718589 | NA | non-coding | downstream | 41990 | 23486099 ~ 23486376 (+) |
| G1718597 | NA | non-coding | downstream | 45233 | 23489342 ~ 23489551 (+) |
| G1718603 | LOC106609391 | non-coding | downstream | 69643 | 23513752 ~ 23513999 (+) |
| G1718609 | NA | non-coding | downstream | 76578 | 23520687 ~ 23521787 (+) |
| G1718610 | NA | non-coding | downstream | 78340 | 23522449 ~ 23522762 (+) |
| G1717785 | NA | other | upstream | 186879 | 23256126 ~ 23256812 (+) |
| ruxf | LOC105021811 | other | upstream | 342882 | 23098972 ~ 23100823 (+) |
| LOC110500038 | LOC106609436 | other | upstream | 420927 | 23014617 ~ 23032420 (+) |
| G1717520 | NA | other | upstream | 563768 | 22820752 ~ 22879923 (+) |
| G1719225 | NA | other | downstream | 629296 | 24073405 ~ 24074448 (+) |
| G1719268 | NA | other | downstream | 691655 | 24135764 ~ 24136323 (+) |
| adm2a | LOC106609361 | other | downstream | 833722 | 24277797 ~ 24294858 (+) |
| LOC110500097 | LOC106576231 | other | downstream | 872529 | 24315919 ~ 24321712 (+) |
| G1720836 | NA | other | downstream | 2167707 | 25611816 ~ 25612268 (+) |
