G1718589


Basic Information

Item Value
gene id G1718589
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 23486099 ~ 23486376 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1968974
GTGTATATATAGTGGTGTAAGCCCCAATATTCACCTTTCGGCTAAAACAAAGTGTCAGAAAAGAGATTGGTTGATTTAAATGTGTCAATGTCAATTCGTGGTTGGCAATACTTCTCTTTTTGGAAGAGCAGATCAGATACACCTCCCACAATCACTCTTTCACACTGTTACTAGATCAGATCACATGAATAATAATAACCTCTCTTATGACTTCATTTATCCAGGAATGTCCTTCAATAGCATTCTAATTAGCATTTTTGGGTAGATATTTATAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1968974 True 278 lncRNA 0.35 1 23486099 23486376

Neighbor

gene id symbol gene type direction distance location
LOC110500058 LOC106576272 coding upstream 62361 23405462 ~ 23423738 (+)
LOC110500056 ccd53 coding upstream 88363 23393527 ~ 23397736 (+)
LOC110500052 NA coding upstream 132330 23341188 ~ 23353769 (+)
th2 LOC106609447 coding upstream 159085 23314335 ~ 23327014 (+)
LOC110500049 LOC106576281 coding upstream 172223 23295783 ~ 23313876 (+)
LOC110500067 LOC106609471 coding downstream 14748 23501124 ~ 23504811 (+)
ada2b LOC106609445 coding downstream 18672 23505048 ~ 23510558 (+)
LOC110500071 LOC106609473 coding downstream 127762 23614138 ~ 23622406 (+)
LOC110500073 LOC106609463 coding downstream 155014 23641390 ~ 23644750 (+)
LOC118942913 NA coding downstream 222086 23708462 ~ 23709161 (+)
G1717875 NA non-coding upstream 41990 23443691 ~ 23444109 (+)
G1717822 NA non-coding upstream 156042 23329589 ~ 23330057 (+)
G1717800 NA non-coding upstream 211044 23274731 ~ 23275055 (+)
G1717794 NA non-coding upstream 219413 23266296 ~ 23266686 (+)
G1718597 NA non-coding downstream 2966 23489342 ~ 23489551 (+)
G1718603 LOC106609391 non-coding downstream 27376 23513752 ~ 23513999 (+)
G1718609 NA non-coding downstream 34311 23520687 ~ 23521787 (+)
G1718610 NA non-coding downstream 36073 23522449 ~ 23522762 (+)
G1718611 NA non-coding downstream 36657 23523033 ~ 23554590 (+)
G1717785 NA other upstream 229287 23256126 ~ 23256812 (+)
ruxf LOC105021811 other upstream 385290 23098972 ~ 23100823 (+)
LOC110500038 LOC106609436 other upstream 463335 23014617 ~ 23032420 (+)
G1717520 NA other upstream 606176 22820752 ~ 22879923 (+)
G1719225 NA other downstream 587029 24073405 ~ 24074448 (+)
G1719268 NA other downstream 649388 24135764 ~ 24136323 (+)
adm2a LOC106609361 other downstream 791455 24277797 ~ 24294858 (+)
LOC110500097 LOC106576231 other downstream 830262 24315919 ~ 24321712 (+)
G1720836 NA other downstream 2125440 25611816 ~ 25612268 (+)

Expression


Co-expression Network