G1718603 (LOC106609391)


Basic Information

Item Value
gene id G1718603
gene name LOC106609391
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 23513752 ~ 23513999 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1968988
GAGTATCAGGGATTTCCCTGTTCAGGGGTAGTCTGTCACTCAGGAAGGCGTTGTATCCATACATCTGAAACAGCCCCTCTGCCTCTTTCTGCTCCTCCTCTGAGAGCTCATCACCCCAGCTTGTAAACAGAGCTGAGTTGGGGTACAACTTCTTCACCACCTTCCTCTCCTTCTTGACCTCGGGAGCCTTCACAGCCTGCCCCTCTTTCAGACTGATCCCGTTGTCGATTGACTTCACTGTGGACACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1968988 True 248 lncRNA 0.52 1 23513752 23513999

Neighbor

gene id symbol gene type direction distance location
ada2b LOC106609445 coding upstream 3194 23505048 ~ 23510558 (+)
LOC110500067 LOC106609471 coding upstream 8941 23501124 ~ 23504811 (+)
LOC110500058 LOC106576272 coding upstream 90014 23405462 ~ 23423738 (+)
LOC110500056 ccd53 coding upstream 116016 23393527 ~ 23397736 (+)
LOC110500052 NA coding upstream 159983 23341188 ~ 23353769 (+)
LOC110500071 LOC106609473 coding downstream 100139 23614138 ~ 23622406 (+)
LOC110500073 LOC106609463 coding downstream 127391 23641390 ~ 23644750 (+)
LOC118942913 NA coding downstream 194463 23708462 ~ 23709161 (+)
LOC110500077 etv6 coding downstream 196270 23710269 ~ 23732052 (+)
LOC110500079 LOC106576259 coding downstream 219011 23733010 ~ 23791315 (+)
G1718597 NA non-coding upstream 24201 23489342 ~ 23489551 (+)
G1718589 NA non-coding upstream 27376 23486099 ~ 23486376 (+)
G1717875 NA non-coding upstream 69643 23443691 ~ 23444109 (+)
G1717822 NA non-coding upstream 183695 23329589 ~ 23330057 (+)
G1718609 NA non-coding downstream 6688 23520687 ~ 23521787 (+)
G1718610 NA non-coding downstream 8450 23522449 ~ 23522762 (+)
G1718611 NA non-coding downstream 9034 23523033 ~ 23554590 (+)
G1718629 LOC106609389 non-coding downstream 34117 23548116 ~ 23549040 (+)
G1718685 NA non-coding downstream 56624 23570623 ~ 23572286 (+)
G1717785 NA other upstream 256940 23256126 ~ 23256812 (+)
ruxf LOC105021811 other upstream 412943 23098972 ~ 23100823 (+)
LOC110500038 LOC106609436 other upstream 490988 23014617 ~ 23032420 (+)
G1717520 NA other upstream 633829 22820752 ~ 22879923 (+)
G1719225 NA other downstream 559406 24073405 ~ 24074448 (+)
G1719268 NA other downstream 621765 24135764 ~ 24136323 (+)
adm2a LOC106609361 other downstream 763832 24277797 ~ 24294858 (+)
LOC110500097 LOC106576231 other downstream 802639 24315919 ~ 24321712 (+)
G1720836 NA other downstream 2097817 25611816 ~ 25612268 (+)

Expression


Co-expression Network