Gene
RNA
| Item | Value |
|---|---|
| gene id | G1718629 |
| gene name | LOC106609389 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 23548116 ~ 23549040 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: probable polypeptide N-acetylgalactosaminyltransferase 8 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1969016 | True | 754 | lncRNA | 0.45 | 2 | 23548116 | 23549040 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ada2b | LOC106609445 | coding | upstream | 37558 | 23505048 ~ 23510558 (+) |
| LOC110500067 | LOC106609471 | coding | upstream | 43305 | 23501124 ~ 23504811 (+) |
| LOC110500058 | LOC106576272 | coding | upstream | 124378 | 23405462 ~ 23423738 (+) |
| LOC110500056 | ccd53 | coding | upstream | 150380 | 23393527 ~ 23397736 (+) |
| LOC110500052 | NA | coding | upstream | 194347 | 23341188 ~ 23353769 (+) |
| LOC110500071 | LOC106609473 | coding | downstream | 65098 | 23614138 ~ 23622406 (+) |
| LOC110500073 | LOC106609463 | coding | downstream | 92350 | 23641390 ~ 23644750 (+) |
| LOC118942913 | NA | coding | downstream | 159422 | 23708462 ~ 23709161 (+) |
| LOC110500077 | etv6 | coding | downstream | 161229 | 23710269 ~ 23732052 (+) |
| LOC110500079 | LOC106576259 | coding | downstream | 183970 | 23733010 ~ 23791315 (+) |
| G1718610 | NA | non-coding | upstream | 25354 | 23522449 ~ 23522762 (+) |
| G1718609 | NA | non-coding | upstream | 26329 | 23520687 ~ 23521787 (+) |
| G1718603 | LOC106609391 | non-coding | upstream | 34117 | 23513752 ~ 23513999 (+) |
| G1718597 | NA | non-coding | upstream | 58565 | 23489342 ~ 23489551 (+) |
| G1718589 | NA | non-coding | upstream | 61740 | 23486099 ~ 23486376 (+) |
| G1718685 | NA | non-coding | downstream | 21583 | 23570623 ~ 23572286 (+) |
| G1718689 | NA | non-coding | downstream | 29317 | 23578357 ~ 23578624 (+) |
| G1718691 | NA | non-coding | downstream | 31849 | 23580889 ~ 23581147 (+) |
| G1718696 | NA | non-coding | downstream | 35942 | 23584982 ~ 23585328 (+) |
| G1718701 | NA | non-coding | downstream | 44015 | 23593055 ~ 23593510 (+) |
| G1717785 | NA | other | upstream | 291304 | 23256126 ~ 23256812 (+) |
| ruxf | LOC105021811 | other | upstream | 447307 | 23098972 ~ 23100823 (+) |
| LOC110500038 | LOC106609436 | other | upstream | 525352 | 23014617 ~ 23032420 (+) |
| G1717520 | NA | other | upstream | 668193 | 22820752 ~ 22879923 (+) |
| G1719225 | NA | other | downstream | 524365 | 24073405 ~ 24074448 (+) |
| G1719268 | NA | other | downstream | 586724 | 24135764 ~ 24136323 (+) |
| adm2a | LOC106609361 | other | downstream | 728791 | 24277797 ~ 24294858 (+) |
| LOC110500097 | LOC106576231 | other | downstream | 767598 | 24315919 ~ 24321712 (+) |
| G1720836 | NA | other | downstream | 2062776 | 25611816 ~ 25612268 (+) |
