G1718739


Basic Information

Item Value
gene id G1718739
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 23627841 ~ 23628071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1969132
gtgtaactgtgcaaacatctgaagatcatcaaaggtaagcaatttaatctattgcttttctgacttttgtgaccaatctacttggctgctaggtgtttgtaatattttgtctactgagagagatgttcttacataaacgcttgttatgctttcgccgaaaagctgtattgaaatctgacacgccaggtggattaacaacaccctaaactgtgttttgctatattgcacttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1969132 True 231 lncRNA 0.38 1 23627841 23628071

Neighbor

gene id symbol gene type direction distance location
LOC110500071 LOC106609473 coding upstream 5435 23614138 ~ 23622406 (+)
ada2b LOC106609445 coding upstream 117283 23505048 ~ 23510558 (+)
LOC110500067 LOC106609471 coding upstream 123030 23501124 ~ 23504811 (+)
LOC110500058 LOC106576272 coding upstream 204103 23405462 ~ 23423738 (+)
LOC110500056 ccd53 coding upstream 230105 23393527 ~ 23397736 (+)
LOC110500073 LOC106609463 coding downstream 13319 23641390 ~ 23644750 (+)
LOC118942913 NA coding downstream 80391 23708462 ~ 23709161 (+)
LOC110500077 etv6 coding downstream 82198 23710269 ~ 23732052 (+)
LOC110500079 LOC106576259 coding downstream 104939 23733010 ~ 23791315 (+)
LOC118943007 NA coding downstream 268897 23896968 ~ 23903687 (+)
G1718734 NA non-coding upstream 15003 23612564 ~ 23612838 (+)
G1718704 NA non-coding upstream 29598 23597984 ~ 23598243 (+)
G1718701 NA non-coding upstream 34331 23593055 ~ 23593510 (+)
G1718696 NA non-coding upstream 42513 23584982 ~ 23585328 (+)
G1718742 NA non-coding downstream 4828 23632899 ~ 23633098 (+)
G1718914 NA non-coding downstream 181140 23809211 ~ 23809507 (+)
G1718963 NA non-coding downstream 215887 23843958 ~ 23844275 (+)
G1717785 NA other upstream 371029 23256126 ~ 23256812 (+)
ruxf LOC105021811 other upstream 527032 23098972 ~ 23100823 (+)
LOC110500038 LOC106609436 other upstream 605077 23014617 ~ 23032420 (+)
G1717520 NA other upstream 747918 22820752 ~ 22879923 (+)
G1719225 NA other downstream 445334 24073405 ~ 24074448 (+)
G1719268 NA other downstream 507693 24135764 ~ 24136323 (+)
adm2a LOC106609361 other downstream 649760 24277797 ~ 24294858 (+)
LOC110500097 LOC106576231 other downstream 688567 24315919 ~ 24321712 (+)
G1720836 NA other downstream 1983745 25611816 ~ 25612268 (+)

Expression


Co-expression Network