G1718964


Basic Information

Item Value
gene id G1718964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 23844411 ~ 23844769 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1969371
gtaattaggagatgtagtggtgtaggggtatTAGATAGATGTAGTGGTGTAGAGGTATTAGGTCGATGTAGTGGTGTAGAGGTATTAGGTAAATGCAgtggtgtaggggtattaggtagatatagtggtgtaggggtattaggtagatgtagtggtgtagATGTACTAGTTAGATGTAgtggtattaggtagatgtagaggtattaggtagatgtagggaTTTTAGGTGGATGTAGTGGTGTAgaggtattaggtagatgtagtgatgtagtggtgtatgggtattaggtagatgtagtggtgtagggttaTTAGGTAGATGTaagggtattaggtagatgtagggaTATTAGGTGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1969371 True 359 lncRNA 0.40 1 23844411 23844769

Neighbor

gene id symbol gene type direction distance location
LOC110500079 LOC106576259 coding upstream 53104 23733010 ~ 23791315 (+)
LOC110500077 etv6 coding upstream 112359 23710269 ~ 23732052 (+)
LOC118942913 NA coding upstream 135250 23708462 ~ 23709161 (+)
LOC110500073 LOC106609463 coding upstream 199661 23641390 ~ 23644750 (+)
LOC110500071 LOC106609473 coding upstream 222005 23614138 ~ 23622406 (+)
LOC118943007 NA coding downstream 52199 23896968 ~ 23903687 (+)
LOC110500082 LOC106609433 coding downstream 65236 23910005 ~ 23936559 (+)
rpap3 LOC106609438 coding downstream 131904 23976673 ~ 23985903 (+)
LOC110500093 LOC106609369 coding downstream 302274 24147043 ~ 24157840 (+)
LOC110500095 LOC106609365 coding downstream 331410 24176179 ~ 24190708 (+)
G1718963 NA non-coding upstream 136 23843958 ~ 23844275 (+)
G1718914 NA non-coding upstream 34904 23809211 ~ 23809507 (+)
G1718742 NA non-coding upstream 211313 23632899 ~ 23633098 (+)
G1718965 NA non-coding downstream 42 23844811 ~ 23845088 (+)
G1718966 NA non-coding downstream 2364 23847133 ~ 23847769 (+)
G1718998 NA non-coding downstream 37395 23882164 ~ 23882378 (+)
G1719102 NA non-coding downstream 94598 23939367 ~ 23939686 (+)
G1719112 NA non-coding downstream 102927 23947696 ~ 23952073 (+)
G1717785 NA other upstream 587599 23256126 ~ 23256812 (+)
ruxf LOC105021811 other upstream 743602 23098972 ~ 23100823 (+)
LOC110500038 LOC106609436 other upstream 821647 23014617 ~ 23032420 (+)
G1717520 NA other upstream 964488 22820752 ~ 22879923 (+)
G1719225 NA other downstream 228636 24073405 ~ 24074448 (+)
G1719268 NA other downstream 290995 24135764 ~ 24136323 (+)
adm2a LOC106609361 other downstream 433062 24277797 ~ 24294858 (+)
LOC110500097 LOC106576231 other downstream 471869 24315919 ~ 24321712 (+)
G1720836 NA other downstream 1767047 25611816 ~ 25612268 (+)

Expression


Co-expression Network