Gene
RNA
| Item | Value |
|---|---|
| gene id | G1718966 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 23847133 ~ 23847769 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1969373 | True | 504 | lncRNA | 0.40 | 2 | 23847133 | 23847769 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500079 | LOC106576259 | coding | upstream | 55826 | 23733010 ~ 23791315 (+) |
| LOC110500077 | etv6 | coding | upstream | 115081 | 23710269 ~ 23732052 (+) |
| LOC118942913 | NA | coding | upstream | 137972 | 23708462 ~ 23709161 (+) |
| LOC110500073 | LOC106609463 | coding | upstream | 202383 | 23641390 ~ 23644750 (+) |
| LOC110500071 | LOC106609473 | coding | upstream | 224727 | 23614138 ~ 23622406 (+) |
| LOC118943007 | NA | coding | downstream | 49199 | 23896968 ~ 23903687 (+) |
| LOC110500082 | LOC106609433 | coding | downstream | 62236 | 23910005 ~ 23936559 (+) |
| rpap3 | LOC106609438 | coding | downstream | 128904 | 23976673 ~ 23985903 (+) |
| LOC110500093 | LOC106609369 | coding | downstream | 299274 | 24147043 ~ 24157840 (+) |
| LOC110500095 | LOC106609365 | coding | downstream | 328410 | 24176179 ~ 24190708 (+) |
| G1718965 | NA | non-coding | upstream | 2045 | 23844811 ~ 23845088 (+) |
| G1718964 | NA | non-coding | upstream | 2364 | 23844411 ~ 23844769 (+) |
| G1718963 | NA | non-coding | upstream | 2858 | 23843958 ~ 23844275 (+) |
| G1718914 | NA | non-coding | upstream | 37626 | 23809211 ~ 23809507 (+) |
| G1718998 | NA | non-coding | downstream | 34395 | 23882164 ~ 23882378 (+) |
| G1719102 | NA | non-coding | downstream | 91598 | 23939367 ~ 23939686 (+) |
| G1719112 | NA | non-coding | downstream | 99927 | 23947696 ~ 23952073 (+) |
| G1719117 | NA | non-coding | downstream | 104806 | 23952575 ~ 23952897 (+) |
| G1719121 | NA | non-coding | downstream | 107911 | 23955680 ~ 23956003 (+) |
| G1717785 | NA | other | upstream | 590321 | 23256126 ~ 23256812 (+) |
| ruxf | LOC105021811 | other | upstream | 746324 | 23098972 ~ 23100823 (+) |
| LOC110500038 | LOC106609436 | other | upstream | 824369 | 23014617 ~ 23032420 (+) |
| G1717520 | NA | other | upstream | 967210 | 22820752 ~ 22879923 (+) |
| G1719225 | NA | other | downstream | 225636 | 24073405 ~ 24074448 (+) |
| G1719268 | NA | other | downstream | 287995 | 24135764 ~ 24136323 (+) |
| adm2a | LOC106609361 | other | downstream | 430062 | 24277797 ~ 24294858 (+) |
| LOC110500097 | LOC106576231 | other | downstream | 468869 | 24315919 ~ 24321712 (+) |
| G1720836 | NA | other | downstream | 1764047 | 25611816 ~ 25612268 (+) |
