G1718998


Basic Information

Item Value
gene id G1718998
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 23882164 ~ 23882378 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1969410
gttgaaactggagcagcagcacgtccaggtggactggggacagcaaggagtcatcatgtcaggtagtcctgaggcatggtcctagggctcaggtcctctgagagagagagagaaagaaagagagaattagagagagcacacttaaattcacacaggacaccgaataggacaggagaagtactccagaaataacagactgaccctagccctccgac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1969410 True 215 lncRNA 0.51 1 23882164 23882378

Neighbor

gene id symbol gene type direction distance location
LOC110500079 LOC106576259 coding upstream 90857 23733010 ~ 23791315 (+)
LOC110500077 etv6 coding upstream 150112 23710269 ~ 23732052 (+)
LOC118942913 NA coding upstream 173003 23708462 ~ 23709161 (+)
LOC110500073 LOC106609463 coding upstream 237414 23641390 ~ 23644750 (+)
LOC110500071 LOC106609473 coding upstream 259758 23614138 ~ 23622406 (+)
LOC118943007 NA coding downstream 14590 23896968 ~ 23903687 (+)
LOC110500082 LOC106609433 coding downstream 27627 23910005 ~ 23936559 (+)
rpap3 LOC106609438 coding downstream 94295 23976673 ~ 23985903 (+)
LOC110500093 LOC106609369 coding downstream 264665 24147043 ~ 24157840 (+)
LOC110500095 LOC106609365 coding downstream 293801 24176179 ~ 24190708 (+)
G1718966 NA non-coding upstream 34395 23847133 ~ 23847769 (+)
G1718965 NA non-coding upstream 37076 23844811 ~ 23845088 (+)
G1718964 NA non-coding upstream 37395 23844411 ~ 23844769 (+)
G1718963 NA non-coding upstream 37889 23843958 ~ 23844275 (+)
G1718914 NA non-coding upstream 72657 23809211 ~ 23809507 (+)
G1719102 NA non-coding downstream 56989 23939367 ~ 23939686 (+)
G1719112 NA non-coding downstream 65318 23947696 ~ 23952073 (+)
G1719117 NA non-coding downstream 70197 23952575 ~ 23952897 (+)
G1719121 NA non-coding downstream 73302 23955680 ~ 23956003 (+)
G1719122 NA non-coding downstream 75133 23957511 ~ 23958195 (+)
G1717785 NA other upstream 625352 23256126 ~ 23256812 (+)
ruxf LOC105021811 other upstream 781355 23098972 ~ 23100823 (+)
LOC110500038 LOC106609436 other upstream 859400 23014617 ~ 23032420 (+)
G1717520 NA other upstream 1002241 22820752 ~ 22879923 (+)
G1719225 NA other downstream 191027 24073405 ~ 24074448 (+)
G1719268 NA other downstream 253386 24135764 ~ 24136323 (+)
adm2a LOC106609361 other downstream 395453 24277797 ~ 24294858 (+)
LOC110500097 LOC106576231 other downstream 434260 24315919 ~ 24321712 (+)
G1720836 NA other downstream 1729438 25611816 ~ 25612268 (+)

Expression


Co-expression Network