Gene
RNA
| Item | Value |
|---|---|
| gene id | G1719194 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 24037456 ~ 24037705 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1969634 | True | 250 | lncRNA | 0.35 | 1 | 24037456 | 24037705 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rpap3 | LOC106609438 | coding | upstream | 51553 | 23976673 ~ 23985903 (+) |
| LOC110500082 | LOC106609433 | coding | upstream | 100897 | 23910005 ~ 23936559 (+) |
| LOC118943007 | NA | coding | upstream | 133769 | 23896968 ~ 23903687 (+) |
| LOC110500079 | LOC106576259 | coding | upstream | 246149 | 23733010 ~ 23791315 (+) |
| LOC110500077 | etv6 | coding | upstream | 305404 | 23710269 ~ 23732052 (+) |
| LOC110500093 | LOC106609369 | coding | downstream | 109338 | 24147043 ~ 24157840 (+) |
| LOC110500095 | LOC106609365 | coding | downstream | 138474 | 24176179 ~ 24190708 (+) |
| adm2a | LOC106609361 | coding | downstream | 240092 | 24277797 ~ 24294858 (+) |
| LOC110500097 | LOC106576231 | coding | downstream | 278214 | 24315919 ~ 24321712 (+) |
| LOC110500099 | LOC106609356 | coding | downstream | 329122 | 24366827 ~ 24374963 (+) |
| G1719191 | LOC106609456 | non-coding | upstream | 364 | 24027774 ~ 24037092 (+) |
| G1719188 | NA | non-coding | upstream | 16008 | 24021197 ~ 24021448 (+) |
| G1719156 | LOC106609441 | non-coding | upstream | 47363 | 23989784 ~ 23990093 (+) |
| G1719155 | LOC106609441 | non-coding | upstream | 47803 | 23989377 ~ 23989653 (+) |
| G1719154 | LOC106609441 | non-coding | upstream | 48247 | 23988865 ~ 23989209 (+) |
| G1719197 | NA | non-coding | downstream | 1230 | 24038935 ~ 24059956 (+) |
| G1719259 | NA | non-coding | downstream | 82325 | 24120030 ~ 24120398 (+) |
| G1719261 | NA | non-coding | downstream | 83652 | 24121357 ~ 24121653 (+) |
| G1719266 | NA | non-coding | downstream | 95653 | 24133358 ~ 24133639 (+) |
| G1719267 | NA | non-coding | downstream | 96380 | 24134085 ~ 24135639 (+) |
| G1717785 | NA | other | upstream | 780644 | 23256126 ~ 23256812 (+) |
| ruxf | LOC105021811 | other | upstream | 936647 | 23098972 ~ 23100823 (+) |
| LOC110500038 | LOC106609436 | other | upstream | 1014692 | 23014617 ~ 23032420 (+) |
| G1717520 | NA | other | upstream | 1157533 | 22820752 ~ 22879923 (+) |
| G1719225 | NA | other | downstream | 35700 | 24073405 ~ 24074448 (+) |
| G1719268 | NA | other | downstream | 98059 | 24135764 ~ 24136323 (+) |
| G1720836 | NA | other | downstream | 1574111 | 25611816 ~ 25612268 (+) |
