G1719269


Basic Information

Item Value
gene id G1719269
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24137266 ~ 24137614 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1969709
ttcagatctaggatgtgttatgttagtgttccctttatttttttgagcagtgtacttaaAATAATGCCTTGTGGCTGTTTTGTTTACTGTAGCAATCTCAGGGCACAGGAATGTGCTTGTGTGTTTAGAGGGTTTGTGTGTTTAGTGATATCAGAGCTTAACCCTGTGAGATAAATGGCATGGTGTCACACTAATCtatccccctctgtcctctacaagtCATTGACGAGTTCCTACGCATTGGAGTCAATGTCTACATCGCAGGCTGTGACGGTACGGTTTGGGATGAAAAAATACAGTATATGTCACTATTTAAAGTCTTGAGCATAGTAAGCAGTGTTATTGGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1969709 True 349 lncRNA 0.41 1 24137266 24137614

Neighbor

gene id symbol gene type direction distance location
rpap3 LOC106609438 coding upstream 151363 23976673 ~ 23985903 (+)
LOC110500082 LOC106609433 coding upstream 200707 23910005 ~ 23936559 (+)
LOC118943007 NA coding upstream 233579 23896968 ~ 23903687 (+)
LOC110500079 LOC106576259 coding upstream 345959 23733010 ~ 23791315 (+)
LOC110500077 etv6 coding upstream 405214 23710269 ~ 23732052 (+)
LOC110500093 LOC106609369 coding downstream 9429 24147043 ~ 24157840 (+)
LOC110500095 LOC106609365 coding downstream 38565 24176179 ~ 24190708 (+)
adm2a LOC106609361 coding downstream 140183 24277797 ~ 24294858 (+)
LOC110500097 LOC106576231 coding downstream 178305 24315919 ~ 24321712 (+)
LOC110500099 LOC106609356 coding downstream 229213 24366827 ~ 24374963 (+)
G1719267 NA non-coding upstream 1627 24134085 ~ 24135639 (+)
G1719266 NA non-coding upstream 3627 24133358 ~ 24133639 (+)
G1719261 NA non-coding upstream 15613 24121357 ~ 24121653 (+)
G1719259 NA non-coding upstream 16868 24120030 ~ 24120398 (+)
G1719197 NA non-coding upstream 77310 24038935 ~ 24059956 (+)
G1719277 NA non-coding downstream 27028 24164642 ~ 24164864 (+)
G1719278 NA non-coding downstream 27449 24165063 ~ 24165387 (+)
G1719281 NA non-coding downstream 33203 24170817 ~ 24171023 (+)
G1719463 NA non-coding downstream 131752 24269366 ~ 24269623 (+)
G1719486 NA non-coding downstream 165168 24302782 ~ 24303202 (+)
G1719268 NA other upstream 943 24135764 ~ 24136323 (+)
G1719225 NA other upstream 62818 24073405 ~ 24074448 (+)
G1717785 NA other upstream 880454 23256126 ~ 23256812 (+)
ruxf LOC105021811 other upstream 1036457 23098972 ~ 23100823 (+)
LOC110500038 LOC106609436 other upstream 1114502 23014617 ~ 23032420 (+)
G1720836 NA other downstream 1474202 25611816 ~ 25612268 (+)
G1720853 NA other downstream 1498721 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1900688 26038302 ~ 26041843 (+)

Expression


Co-expression Network