G1719277


Basic Information

Item Value
gene id G1719277
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24164642 ~ 24164864 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1969724
GGCATAAATGTGAAATGGTTAATAAAGTAATCTTGGTGTTTTGTCATAATTACAGTGCCACCCCTCAAAAATGTATTCATTTTCTCCCAGCAGCTACATAACTAGGGCCATGTTTTGGTCaatcatgtcacatgacctggATTTTAACTTTTATTTTAAGCCTTTTCCAGAAATGagaattagaagaaaaaaatgaaGCATTGTCTGAAGGATAGTGCTGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1969724 True 223 lncRNA 0.35 1 24164642 24164864

Neighbor

gene id symbol gene type direction distance location
LOC110500093 LOC106609369 coding upstream 6802 24147043 ~ 24157840 (+)
rpap3 LOC106609438 coding upstream 178739 23976673 ~ 23985903 (+)
LOC110500082 LOC106609433 coding upstream 228083 23910005 ~ 23936559 (+)
LOC118943007 NA coding upstream 260955 23896968 ~ 23903687 (+)
LOC110500079 LOC106576259 coding upstream 373335 23733010 ~ 23791315 (+)
LOC110500095 LOC106609365 coding downstream 11315 24176179 ~ 24190708 (+)
adm2a LOC106609361 coding downstream 112933 24277797 ~ 24294858 (+)
LOC110500097 LOC106576231 coding downstream 151055 24315919 ~ 24321712 (+)
LOC110500099 LOC106609356 coding downstream 201963 24366827 ~ 24374963 (+)
trnay-gua-63 NA coding downstream 217673 24382537 ~ 24382624 (+)
G1719269 NA non-coding upstream 27028 24137266 ~ 24137614 (+)
G1719267 NA non-coding upstream 29003 24134085 ~ 24135639 (+)
G1719266 NA non-coding upstream 31003 24133358 ~ 24133639 (+)
G1719261 NA non-coding upstream 42989 24121357 ~ 24121653 (+)
G1719259 NA non-coding upstream 44244 24120030 ~ 24120398 (+)
G1719278 NA non-coding downstream 199 24165063 ~ 24165387 (+)
G1719281 NA non-coding downstream 5953 24170817 ~ 24171023 (+)
G1719463 NA non-coding downstream 104502 24269366 ~ 24269623 (+)
G1719486 NA non-coding downstream 137918 24302782 ~ 24303202 (+)
G1719493 NA non-coding downstream 145182 24310046 ~ 24310426 (+)
G1719268 NA other upstream 28319 24135764 ~ 24136323 (+)
G1719225 NA other upstream 90194 24073405 ~ 24074448 (+)
G1717785 NA other upstream 907830 23256126 ~ 23256812 (+)
ruxf LOC105021811 other upstream 1063833 23098972 ~ 23100823 (+)
LOC110500038 LOC106609436 other upstream 1141878 23014617 ~ 23032420 (+)
G1720836 NA other downstream 1446952 25611816 ~ 25612268 (+)
G1720853 NA other downstream 1471471 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1873438 26038302 ~ 26041843 (+)

Expression


Co-expression Network