G1719493



Basic Information


Item Value
gene id G1719493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24310046 ~ 24310426 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1969983
cCGAAATTGTTgacacccctattactagcctgttcaacctctctttcgtgtcgtctgagattcccaaagattggaaagcagctgtggtcatccccctcttcaaagggggggacactcttgacccaaactgctgcagacctatttctatcctaccctgcctttctaaggtcttcgaaagccaagtcaacaaacagattaccgaccatttcgaatcccaccataccttctccgctatgcaatctggtttcagagctggtcatgggtgcacctcagccacgctcaaggtcctaaacgatatcttaaccgccatcgataagaaacaatactgtgcagccgtattcattgacctggccaaggctttcgactctgtcaatcaccaca

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1969983 True 381 lncRNA 0.49 1 24310046 24310426

Neighbor


gene id symbol gene type direction distance location
adm2a LOC106609361 coding upstream 15188 24277797 ~ 24294858 (+)
LOC110500095 LOC106609365 coding upstream 119338 24176179 ~ 24190708 (+)
LOC110500093 LOC106609369 coding upstream 152206 24147043 ~ 24157840 (+)
rpap3 LOC106609438 coding upstream 324143 23976673 ~ 23985903 (+)
LOC110500082 LOC106609433 coding upstream 373487 23910005 ~ 23936559 (+)
LOC110500097 LOC106576231 coding downstream 5493 24315919 ~ 24321712 (+)
LOC110500099 LOC106609356 coding downstream 56401 24366827 ~ 24374963 (+)
trnay-gua-63 NA coding downstream 72111 24382537 ~ 24382624 (+)
trnay-gua-64 NA coding downstream 72722 24383148 ~ 24383235 (+)
LOC110500102 ankrd16 coding downstream 73015 24383441 ~ 24384781 (+)
G1719486 NA non-coding upstream 6844 24302782 ~ 24303202 (+)
G1719463 NA non-coding upstream 40423 24269366 ~ 24269623 (+)
G1719281 NA non-coding upstream 139023 24170817 ~ 24171023 (+)
G1719278 NA non-coding upstream 144659 24165063 ~ 24165387 (+)
G1719277 NA non-coding upstream 145182 24164642 ~ 24164864 (+)
G1719507 NA non-coding downstream 40269 24350695 ~ 24351007 (+)
G1719508 NA non-coding downstream 40768 24351194 ~ 24351550 (+)
G1719511 NA non-coding downstream 51217 24361643 ~ 24361890 (+)
G1719512 LOC106576230 non-coding downstream 51692 24362118 ~ 24362462 (+)
G1719514 NA non-coding downstream 55407 24365833 ~ 24366066 (+)
G1719268 NA other upstream 173723 24135764 ~ 24136323 (+)
G1719225 NA other upstream 235598 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1053234 23256126 ~ 23256812 (+)
ruxf LOC105021811 other upstream 1209237 23098972 ~ 23100823 (+)
G1720836 NA other downstream 1301390 25611816 ~ 25612268 (+)
G1720853 NA other downstream 1325909 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1727876 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 2019348 26324744 ~ 26333964 (+)

Expression



Co-expression Network