G1719571


Basic Information

Item Value
gene id G1719571
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24334067 ~ 24338818 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970066
TGGTGGTGTGTTGAATAGGTTGAGAGGTGTGAGTAGGTAAATATATGGAGATTGTGCTCCGGTTTAAGGCCTTCCCACACTGTACGTCAGATTCAGTCTATTACGATTATTACATGTCACACTGTGTGATGTTACCAAATTAAAATCATAATATCAACTTGGCCAGATTGTACGATTTGCTTCAGTTCTGTCGAGAAAGTCTGCGATGGCTAAAATTGCAGAAAGGCTATGACAATGTTCTGGCAGTATGAGTGTTTGGCTGAAAATCTCCCTCCTGACAGAATTCTCCTCCACGCACGTactcaattcttcattgctgAGACTTccttgctagttgagatttcactagtaatgtctgcagttttcgggtttggctatttgtttcaagtgtattaatttaaaaaaatatatctttgCCAAAATCTGTCATCTCTCGCATGTCTATActtttaatataacacacattcATTTCGGTTGCCTATTCTGACATGAAGTTTGTTCCATAGAAAGTATGTGACTCTgatgtgtgccacagaaagtatttgactgtagtgacaaaattaaggaaattagaaggggggGAGGATTTTGGCCAAAATCCCTCACCCCCTT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970066 True 612 lncRNA 0.39 2 24334067 24338818
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110500098 LOC106609359 coding downstream 3920 24321802 ~ 24330147 (-)
LOC110500094 LOC106609364 coding downstream 66903 24191659 ~ 24267164 (-)
LOC110501036 cbll1 coding downstream 156127 24164958 ~ 24177940 (-)
LOC110501035 LOC106609376 coding downstream 222142 24110656 ~ 24111925 (-)
LOC110501034 NA coding downstream 252783 24079789 ~ 24081284 (-)
LOC110500100 glt8d2 coding upstream 36204 24375022 ~ 24381449 (-)
LOC110500106 LOC106609352 coding upstream 142322 24481140 ~ 24517204 (-)
LOC110500107 NA coding upstream 182986 24521804 ~ 24534750 (-)
LOC110500110 podxl coding upstream 266074 24604892 ~ 24622595 (-)
LOC110500111 LOC106609346 coding upstream 301272 24640090 ~ 24643864 (-)
G1719566 NA non-coding downstream 14899 24318801 ~ 24319168 (-)
G1719565 NA non-coding downstream 15340 24318525 ~ 24318727 (-)
G1719564 NA non-coding downstream 16193 24317636 ~ 24317874 (-)
G1719563 LOC106576231 non-coding downstream 16487 24316602 ~ 24317580 (-)
G1719561 NA non-coding downstream 22972 24310845 ~ 24311095 (-)
G1719574 NA non-coding upstream 11431 24350249 ~ 24350475 (-)
G1719575 NA non-coding upstream 11838 24350656 ~ 24352638 (-)
G1719583 NA non-coding upstream 49530 24388348 ~ 24388572 (-)
G1719539 NA non-coding upstream 69451 24408269 ~ 24408799 (-)
G1719542 NA non-coding upstream 70440 24409258 ~ 24409603 (-)
G1719407 NA other downstream 188719 24137726 ~ 24145348 (-)
LOC110500092 LOC106609371 other downstream 267717 24060587 ~ 24066411 (-)
LOC110500089 LOC106609371 other downstream 290439 24037871 ~ 24043628 (-)
G1718713 NA other downstream 751217 23582575 ~ 23582850 (-)
LOC110500069 LOC106609440 other downstream 757317 23574474 ~ 23586547 (-)
LOC110500148 LOC106609286 other upstream 1962924 26301474 ~ 26310640 (-)
LOC110501044 LOC106609327 other upstream 3586599 27924301 ~ 27929621 (-)
LOC110501045 LOC106609328 other upstream 3743995 28002248 ~ 28103013 (-)
G1723535 NA other upstream 3891705 28230523 ~ 28230880 (-)
G1723713 utp20 other upstream 4030800 28369618 ~ 28371062 (-)

Expression

G1719571 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G1719571 Expression in each Bioproject

Bar chart with 18 bars.
G1719571 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
End of interactive chart.

Co-expression Network