G1719511


Basic Information

Item Value
gene id G1719511
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24361643 ~ 24361890 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970001
GTGATTGGTGGGTGAGGCTCAGTGTTCCATTGGGATTCTCCTGTACCCAGGGCCCAGCAGCAGTGCGGAACCGGGCCCACTCCAGAGGTAGAACCCGTAGGTACCCAGGGTAACCAAGAACCTCCAGCAAGACCAGGACCTGCTCCTCAGTCAGCCCAGCATGGGAGAGGTGAACGAGGCAGAGAGCGTCCCATATCCAGTCTCTGAGATCTGGAGAGAAGGAGGCAGTAAAGGTTAGATACAACAAT

Function

NR:

description
tetratricopeptide repeat protein 41-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970001 True 248 lncRNA 0.56 1 24361643 24361890

Neighbor

gene id symbol gene type direction distance location
LOC110500097 LOC106576231 coding upstream 39931 24315919 ~ 24321712 (+)
adm2a LOC106609361 coding upstream 66785 24277797 ~ 24294858 (+)
LOC110500095 LOC106609365 coding upstream 170935 24176179 ~ 24190708 (+)
LOC110500093 LOC106609369 coding upstream 203803 24147043 ~ 24157840 (+)
rpap3 LOC106609438 coding upstream 375740 23976673 ~ 23985903 (+)
LOC110500099 LOC106609356 coding downstream 4937 24366827 ~ 24374963 (+)
trnay-gua-63 NA coding downstream 20647 24382537 ~ 24382624 (+)
trnay-gua-64 NA coding downstream 21258 24383148 ~ 24383235 (+)
LOC110500102 ankrd16 coding downstream 21551 24383441 ~ 24384781 (+)
LOC110500103 LOC106609353 coding downstream 27422 24389312 ~ 24401010 (+)
G1719508 NA non-coding upstream 10093 24351194 ~ 24351550 (+)
G1719507 NA non-coding upstream 10636 24350695 ~ 24351007 (+)
G1719493 NA non-coding upstream 51217 24310046 ~ 24310426 (+)
G1719486 NA non-coding upstream 58441 24302782 ~ 24303202 (+)
G1719463 NA non-coding upstream 92020 24269366 ~ 24269623 (+)
G1719512 LOC106576230 non-coding downstream 228 24362118 ~ 24362462 (+)
G1719514 NA non-coding downstream 3943 24365833 ~ 24366066 (+)
G1719529 NA non-coding downstream 41171 24403061 ~ 24403271 (+)
G1719520 NA non-coding downstream 46372 24408262 ~ 24408830 (+)
G1719524 NA non-coding downstream 49620 24411510 ~ 24412412 (+)
G1719268 NA other upstream 225320 24135764 ~ 24136323 (+)
G1719225 NA other upstream 287195 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1104831 23256126 ~ 23256812 (+)
G1720836 NA other downstream 1249926 25611816 ~ 25612268 (+)
G1720853 NA other downstream 1274445 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1676412 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1967884 26324744 ~ 26333964 (+)
G1722079 NA other downstream 2459757 26821647 ~ 26821935 (+)

Expression


Co-expression Network