G1719514


Basic Information

Item Value
gene id G1719514
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24365833 ~ 24366066 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970004
CCAGAGgtgcagttgaagttggaagagTTACAGGTGGAGGAGTTGAAACTGTCAATCATTGTGAGACTGAAGATGAGGGAGAAGGAGTTGAAATGAATGTAGATGAGCAGCTGAATGTTGTTAGCAGTTGAGAGGTGGGTTGGTAGTGTCTGCaactgagtcaatgtgaggaatgggaaaaaactcTGATCACATGAAAAAGAAAGGGGAGGGTCTATTCCACACCAAATATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970004 True 234 lncRNA 0.44 1 24365833 24366066

Neighbor

gene id symbol gene type direction distance location
LOC110500097 LOC106576231 coding upstream 44121 24315919 ~ 24321712 (+)
adm2a LOC106609361 coding upstream 70975 24277797 ~ 24294858 (+)
LOC110500095 LOC106609365 coding upstream 175125 24176179 ~ 24190708 (+)
LOC110500093 LOC106609369 coding upstream 207993 24147043 ~ 24157840 (+)
rpap3 LOC106609438 coding upstream 379930 23976673 ~ 23985903 (+)
LOC110500099 LOC106609356 coding downstream 761 24366827 ~ 24374963 (+)
trnay-gua-63 NA coding downstream 16471 24382537 ~ 24382624 (+)
trnay-gua-64 NA coding downstream 17082 24383148 ~ 24383235 (+)
LOC110500102 ankrd16 coding downstream 17375 24383441 ~ 24384781 (+)
LOC110500103 LOC106609353 coding downstream 23246 24389312 ~ 24401010 (+)
G1719512 LOC106576230 non-coding upstream 3371 24362118 ~ 24362462 (+)
G1719511 NA non-coding upstream 3943 24361643 ~ 24361890 (+)
G1719508 NA non-coding upstream 14283 24351194 ~ 24351550 (+)
G1719507 NA non-coding upstream 14826 24350695 ~ 24351007 (+)
G1719493 NA non-coding upstream 55407 24310046 ~ 24310426 (+)
G1719529 NA non-coding downstream 36995 24403061 ~ 24403271 (+)
G1719520 NA non-coding downstream 42196 24408262 ~ 24408830 (+)
G1719524 NA non-coding downstream 45444 24411510 ~ 24412412 (+)
asb13a.2 LOC106609355 non-coding downstream 47800 24405619 ~ 24414681 (+)
G1719596 NA non-coding downstream 51945 24418011 ~ 24418237 (+)
G1719268 NA other upstream 229510 24135764 ~ 24136323 (+)
G1719225 NA other upstream 291385 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1109021 23256126 ~ 23256812 (+)
G1720836 NA other downstream 1245750 25611816 ~ 25612268 (+)
G1720853 NA other downstream 1270269 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1672236 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1963708 26324744 ~ 26333964 (+)
G1722079 NA other downstream 2455581 26821647 ~ 26821935 (+)

Expression


Co-expression Network