G1719520


Basic Information

Item Value
gene id G1719520
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24408262 ~ 24408830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970012
ACTTGTAGCCTGAATTGATGTGTCTACTTGTAGCCTGAATTGATGTGTCTACTTGTAGCCTGAATTGATGTACGCGCGCGTCAGTCTTTGCCAGTCATCCTTGCCTTGGAAAAATATCAGTGTTCTCCTCGAACTACGCCGCATTTTGGAGCGTCTATAATATGCCTCCCAATTTCAAGTCCATTTTTCATGCGGCTGACATGTGGTTATGATAAATATCTATTTACAGaagcatatttatttttttaggatGCAATACCAAACCACACCAGCTGACTTTAACCTCTGACAATACTCAGTCCTACGTCAGAAAGATATTTCTCCAGTATTTTGAACATAGACTAAGTCCATCTGTCCTGTCCCTCAAGTTAATGTCTATCCTACTCATGTTCCCTGAAGCTGATCAATTAGTACTATAACATTCAGTTTAGTTACGGGTCAGTAACTGACGATGAGACCCAGACAGATTCCTCTGCCTCAGAGCCACTCGTGGAATGTGAGACCAGGTCTGTGTGAGAAGCCACACAGCAACAGTATCCTAGGCATCAGACACAGACACCTCTTGTAAG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970012 True 569 lncRNA 0.43 1 24408262 24408830

Neighbor

gene id symbol gene type direction distance location
asb13a.1 LOC106609354 coding upstream 2724 24401158 ~ 24405538 (+)
LOC110500103 LOC106609353 coding upstream 7252 24389312 ~ 24401010 (+)
LOC110500102 ankrd16 coding upstream 23481 24383441 ~ 24384781 (+)
trnay-gua-64 NA coding upstream 25027 24383148 ~ 24383235 (+)
trnay-gua-63 NA coding upstream 25638 24382537 ~ 24382624 (+)
mkln1 LOC106609349 coding downstream 166978 24575808 ~ 24603395 (+)
LOC110500922 LOC106576224 coding downstream 225847 24634677 ~ 24637555 (+)
LOC110501038 NA coding downstream 244397 24653227 ~ 24657324 (+)
LOC110500114 LOC106576221 coding downstream 250997 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding downstream 312138 24720968 ~ 24723685 (+)
G1719529 NA non-coding upstream 4991 24403061 ~ 24403271 (+)
G1719514 NA non-coding upstream 42196 24365833 ~ 24366066 (+)
G1719512 LOC106576230 non-coding upstream 45800 24362118 ~ 24362462 (+)
G1719511 NA non-coding upstream 46372 24361643 ~ 24361890 (+)
G1719508 NA non-coding upstream 56712 24351194 ~ 24351550 (+)
G1719524 NA non-coding downstream 2680 24411510 ~ 24412412 (+)
asb13a.2 LOC106609355 non-coding downstream 5036 24405619 ~ 24414681 (+)
G1719596 NA non-coding downstream 9181 24418011 ~ 24418237 (+)
G1719612 NA non-coding downstream 24214 24433044 ~ 24433314 (+)
G1719615 NA non-coding downstream 26814 24435644 ~ 24436052 (+)
LOC110500097 LOC106576231 other upstream 90724 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 113465 24277797 ~ 24294858 (+)
G1719268 NA other upstream 271939 24135764 ~ 24136323 (+)
G1719225 NA other upstream 333814 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1151450 23256126 ~ 23256812 (+)
G1720836 NA other downstream 1202986 25611816 ~ 25612268 (+)
G1720853 NA other downstream 1227505 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1629472 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1920944 26324744 ~ 26333964 (+)
G1722079 NA other downstream 2412817 26821647 ~ 26821935 (+)

Expression


Co-expression Network