G1719524


Basic Information

Item Value
gene id G1719524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24411510 ~ 24412412 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970016
TGTTAAGGCTGCTAGATCATCGCTTGCGGCATTCGAGAGCTTCTTTTTTTTCTACCACGACAGGAACCTATTTGGAACTGTTTTCCGTGGAAACAACGCGGCATCATCCATTACCGTTTCAACCATCCAGAACACATCCATAAATACGCTCAGGAGCAGAAATAGCTGGAGCCCTCCCTGTTCACATGAAGGAATGAGTATAAATAccctcttttaaaaaaaaaaaagaagcttgtTAAAATAACTGGACCCGGTCCAGAAGGGATCTGCTACTGCTAAGTCTTAAAATAGGCTGACCACGTAGATGGTTTGAAAGCATTTCTCTCCGTCTTAACATTAAGATGAAGCAGACGGAGGAGACGACAACAGGCATGAGAAGAATGTTCAGTTAAAACATATTTGAACAAATAAAAAGTGCAATTTGGGGATTTTGGATCAGCCTTTTATTAAAAGGAATGATACACCTGTTTCAAAGGCACTTTCTCTGGCTGTTCAGATAAGGCAAAACCAGTCAAAGGTATCTGCACAGGGATTTCAAACATCAGGTATTTGGTGCTGTGCAGCCAACAGAGGTTATTTTTCAATCAAGCAATATATAACATCAAAGTTGAATGGATCTAGCATGCTGCCCACACTTGATAAAGTATATTCGTGAATCCCTATTGGGTATTAAGAATGCTACaaatatctatttattatgaTACATGTTTGTGTTCCTGTTTAAGTCTGTCAGAGTCAAATACTATTGTGTGAAGTATTGTGTGAATATATCCTCCCCGGAAATGTATGTATAAATGACTGTGTTGCTCTGTATACTGTAAGACTGACATTGTGTGTTTAAGAACGACATTGTTGCATATGCTCACTGCCTTTTGGATTTTATTACGATAAGCTTGATTCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970016 True 903 lncRNA 0.38 1 24411510 24412412

Neighbor

gene id symbol gene type direction distance location
asb13a.1 LOC106609354 coding upstream 5972 24401158 ~ 24405538 (+)
LOC110500103 LOC106609353 coding upstream 10500 24389312 ~ 24401010 (+)
LOC110500102 ankrd16 coding upstream 26729 24383441 ~ 24384781 (+)
trnay-gua-64 NA coding upstream 28275 24383148 ~ 24383235 (+)
trnay-gua-63 NA coding upstream 28886 24382537 ~ 24382624 (+)
mkln1 LOC106609349 coding downstream 163396 24575808 ~ 24603395 (+)
LOC110500922 LOC106576224 coding downstream 222265 24634677 ~ 24637555 (+)
LOC110501038 NA coding downstream 240815 24653227 ~ 24657324 (+)
LOC110500114 LOC106576221 coding downstream 247415 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding downstream 308556 24720968 ~ 24723685 (+)
G1719520 NA non-coding upstream 2680 24408262 ~ 24408830 (+)
G1719529 NA non-coding upstream 8239 24403061 ~ 24403271 (+)
G1719514 NA non-coding upstream 45444 24365833 ~ 24366066 (+)
G1719512 LOC106576230 non-coding upstream 49048 24362118 ~ 24362462 (+)
G1719511 NA non-coding upstream 49620 24361643 ~ 24361890 (+)
asb13a.2 LOC106609355 non-coding downstream 1454 24405619 ~ 24414681 (+)
G1719596 NA non-coding downstream 5599 24418011 ~ 24418237 (+)
G1719612 NA non-coding downstream 20632 24433044 ~ 24433314 (+)
G1719615 NA non-coding downstream 23232 24435644 ~ 24436052 (+)
G1719632 NA non-coding downstream 42914 24455326 ~ 24455621 (+)
LOC110500097 LOC106576231 other upstream 93972 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 116713 24277797 ~ 24294858 (+)
G1719268 NA other upstream 275187 24135764 ~ 24136323 (+)
G1719225 NA other upstream 337062 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1154698 23256126 ~ 23256812 (+)
G1720836 NA other downstream 1199404 25611816 ~ 25612268 (+)
G1720853 NA other downstream 1223923 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1625890 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1917362 26324744 ~ 26333964 (+)
G1722079 NA other downstream 2409235 26821647 ~ 26821935 (+)

Expression


Co-expression Network