G1719644



Basic Information


Item Value
gene id G1719644
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24473049 ~ 24473359 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1970140
gtagagtttatgtcatcttatcattgatgagaatgtctcagatgacaaccaaactgacatcatattcattaagtaccaccgcatatgttccattggtcggattacaagaatatagttcatttccccccaccttctgatgttcctagaatctctatgttaaccaagggttttgcaaatgtaacatcagtagggtagagagaggaaaaaggaggaaagaggtatttatgactgtcataaacctacccccaggccaaagTCATGACATAAGTTAGCTGAATAGCACACGACTCAGTCACAATTAAGGTTATCCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1970140 True 311 lncRNA 0.40 1 24473049 24473359

Neighbor


gene id symbol gene type direction distance location
asb13a.2 LOC106609355 coding upstream 58870 24405619 ~ 24414681 (+)
asb13a.1 LOC106609354 coding upstream 67511 24401158 ~ 24405538 (+)
LOC110500103 LOC106609353 coding upstream 72039 24389312 ~ 24401010 (+)
LOC110500102 ankrd16 coding upstream 88268 24383441 ~ 24384781 (+)
trnay-gua-64 NA coding upstream 89814 24383148 ~ 24383235 (+)
mkln1 LOC106609349 coding downstream 102449 24575808 ~ 24603395 (+)
LOC110500922 LOC106576224 coding downstream 161318 24634677 ~ 24637555 (+)
LOC110501038 NA coding downstream 179868 24653227 ~ 24657324 (+)
LOC110500114 LOC106576221 coding downstream 186468 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding downstream 247609 24720968 ~ 24723685 (+)
G1719634 LOC107575789 non-coding upstream 15016 24457647 ~ 24458033 (+)
G1719632 NA non-coding upstream 17428 24455326 ~ 24455621 (+)
G1719615 NA non-coding upstream 36997 24435644 ~ 24436052 (+)
G1719612 NA non-coding upstream 39735 24433044 ~ 24433314 (+)
G1719596 NA non-coding upstream 54812 24418011 ~ 24418237 (+)
G1719647 LOC106609352 non-coding downstream 12304 24485663 ~ 24486295 (+)
G1719657 NA non-coding downstream 21939 24495298 ~ 24495524 (+)
G1719695 NA non-coding downstream 56797 24530156 ~ 24594390 (+)
G1719705 NA non-coding downstream 90898 24564257 ~ 24565340 (+)
G1719795 NA non-coding downstream 236556 24709915 ~ 24717545 (+)
LOC110500097 LOC106576231 other upstream 155511 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 178252 24277797 ~ 24294858 (+)
G1719268 NA other upstream 336726 24135764 ~ 24136323 (+)
G1719225 NA other upstream 398601 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1216237 23256126 ~ 23256812 (+)
G1720836 NA other downstream 1138457 25611816 ~ 25612268 (+)
G1720853 NA other downstream 1162976 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1564943 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1856415 26324744 ~ 26333964 (+)
G1722079 NA other downstream 2348288 26821647 ~ 26821935 (+)

Expression



Co-expression Network