G1719647 (LOC106609352)


Basic Information

Item Value
gene id G1719647
gene name LOC106609352
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24485663 ~ 24486295 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970144
CAAATACCGAGGGGACttttaaaacaaacaaaagtcTGAACTCTTGTATGAGAATCaaaagagaaaggggagagaacaGGAAAAGCGTCCAGCCCTCTGGCTTTAATAACTCTGTCCCAGGCTAGGTTGAATACCGTGGCGTCTGGCTATGTGACCTGGAGCGCACTCAGTCATCTGGAGCGCTTTAGCAGGGCCAGCCGAACTAGACATCAGGTGCCCTTCTGGTGGACGTCTAAGGTCTCCGACCACAGCGTGCTGTTGCGTCTCTTGGGCGGCGTGGGCGCCGCCGCCTTACTGCATGGCTTCTGGGGCACGCCCGGCGTCTTGCCACCACTGCCATCGCCCCGGAAGGACATGGACTGGATGGTCTGGCCGAAGCGCCGGACGGCCCCATTCCTCACGGGGGAGATGAGGTTAGCCAGCGAGCTCACCCTGCCGAGAGGACGGACACGCTTGTTGCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970144 True 461 lncRNA 0.58 2 24485663 24486295

Neighbor

gene id symbol gene type direction distance location
asb13a.2 LOC106609355 coding upstream 71484 24405619 ~ 24414681 (+)
asb13a.1 LOC106609354 coding upstream 80125 24401158 ~ 24405538 (+)
LOC110500103 LOC106609353 coding upstream 84653 24389312 ~ 24401010 (+)
LOC110500102 ankrd16 coding upstream 100882 24383441 ~ 24384781 (+)
trnay-gua-64 NA coding upstream 102428 24383148 ~ 24383235 (+)
mkln1 LOC106609349 coding downstream 89513 24575808 ~ 24603395 (+)
LOC110500922 LOC106576224 coding downstream 148382 24634677 ~ 24637555 (+)
LOC110501038 NA coding downstream 166932 24653227 ~ 24657324 (+)
LOC110500114 LOC106576221 coding downstream 173532 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding downstream 234673 24720968 ~ 24723685 (+)
G1719644 NA non-coding upstream 12304 24473049 ~ 24473359 (+)
G1719634 LOC107575789 non-coding upstream 27630 24457647 ~ 24458033 (+)
G1719632 NA non-coding upstream 30042 24455326 ~ 24455621 (+)
G1719615 NA non-coding upstream 49611 24435644 ~ 24436052 (+)
G1719612 NA non-coding upstream 52349 24433044 ~ 24433314 (+)
G1719657 NA non-coding downstream 9003 24495298 ~ 24495524 (+)
G1719695 NA non-coding downstream 43861 24530156 ~ 24594390 (+)
G1719705 NA non-coding downstream 77962 24564257 ~ 24565340 (+)
G1719795 NA non-coding downstream 223620 24709915 ~ 24717545 (+)
LOC110500097 LOC106576231 other upstream 168125 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 190866 24277797 ~ 24294858 (+)
G1719268 NA other upstream 349340 24135764 ~ 24136323 (+)
G1719225 NA other upstream 411215 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1228851 23256126 ~ 23256812 (+)
G1720836 NA other downstream 1125521 25611816 ~ 25612268 (+)
G1720853 NA other downstream 1150040 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1552007 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1843479 26324744 ~ 26333964 (+)
G1722079 NA other downstream 2335352 26821647 ~ 26821935 (+)

Expression


Co-expression Network