G1719657


Basic Information

Item Value
gene id G1719657
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24495298 ~ 24495524 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970154
AAACGACTGTCTAGCACTGGGATTCAACACACAGCTTGTGGCTTACGCCCATCCACCATCTCCATCCAAAATGCCCTAGCAAGGTTTTGAAGGCATCTCCCAACGTCCTCGGGACATGGATGGAGGTCCAATTTCCAAGTGAATCTGGCTGCTAGATCTCAGTACACAGCATGGCTGTCCTGTACTGAAGCATGGATGTACCTTGTGTTACAATAACTCTGATCGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970154 True 227 lncRNA 0.49 1 24495298 24495524

Neighbor

gene id symbol gene type direction distance location
asb13a.2 LOC106609355 coding upstream 81119 24405619 ~ 24414681 (+)
asb13a.1 LOC106609354 coding upstream 89760 24401158 ~ 24405538 (+)
LOC110500103 LOC106609353 coding upstream 94288 24389312 ~ 24401010 (+)
LOC110500102 ankrd16 coding upstream 110517 24383441 ~ 24384781 (+)
trnay-gua-64 NA coding upstream 112063 24383148 ~ 24383235 (+)
mkln1 LOC106609349 coding downstream 80284 24575808 ~ 24603395 (+)
LOC110500922 LOC106576224 coding downstream 139153 24634677 ~ 24637555 (+)
LOC110501038 NA coding downstream 157703 24653227 ~ 24657324 (+)
LOC110500114 LOC106576221 coding downstream 164303 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding downstream 225444 24720968 ~ 24723685 (+)
G1719647 LOC106609352 non-coding upstream 9003 24485663 ~ 24486295 (+)
G1719644 NA non-coding upstream 21939 24473049 ~ 24473359 (+)
G1719634 LOC107575789 non-coding upstream 37265 24457647 ~ 24458033 (+)
G1719632 NA non-coding upstream 39677 24455326 ~ 24455621 (+)
G1719615 NA non-coding upstream 59246 24435644 ~ 24436052 (+)
G1719695 NA non-coding downstream 34632 24530156 ~ 24594390 (+)
G1719705 NA non-coding downstream 68733 24564257 ~ 24565340 (+)
G1719795 NA non-coding downstream 214391 24709915 ~ 24717545 (+)
G1719811 NA non-coding downstream 259817 24755341 ~ 24756316 (+)
LOC110500097 LOC106576231 other upstream 177760 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 200501 24277797 ~ 24294858 (+)
G1719268 NA other upstream 358975 24135764 ~ 24136323 (+)
G1719225 NA other upstream 420850 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1238486 23256126 ~ 23256812 (+)
G1720836 NA other downstream 1116292 25611816 ~ 25612268 (+)
G1720853 NA other downstream 1140811 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1542778 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1834250 26324744 ~ 26333964 (+)
G1722079 NA other downstream 2326123 26821647 ~ 26821935 (+)

Expression


Co-expression Network