G1719795


Basic Information

Item Value
gene id G1719795
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24709915 ~ 24717545 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970320
ctctggtagactgtagatactatacacctgtcatgtatctggtcctctggtagactgtagatactatacacctgtcatgtatctggtcctctggtagactgtagatactatacacctgtcatgtttctggtagactgtagatactatacacctgtcatgtctctggtagactgtagatactatacacctgtcatgtttctggtcctctggtagactgtagatactatacacctgtcatgtttctggtagactgtagatactatacacctgtcatgtatctggtcctctggtagactgtagatactatacacctgtcatgtctctggtagactgtagatactatacacctgtcatgtatctggtcctctggtagactgtagatactatacacctgtcatgtatctggtcctctggtagactgtagatactatacacctgtcatgtatctggtcctctggtagactgtagatactatacacctgtcatgtctctggtagactgtagatactatacacctgtcatgtctctggtagactgtagatactatacacctgtcatgtctctggtagactgtagatactatacatctgtcatgtctctggtagactgtagatactatacacctgtcaggttctctggtagactgtagatactatacacctgtcatgtttctggtagactgtagataataTACACCTGTCATGtttctggtagactgtagatactatacacctgtcatgtttctggtagactgtagatactctacacctgtcatgtctctggtagactgtagatactaaacacctgtcatgtatctggtcctctggtagactgtagatactaaacacctgtcatgtctctggtcctctggtagactgtagatactctACACCTGGCATGTCTCTGGTTCTGAAGCTACTGTCACGGTGGAGGAGTTTTGAAATGCGTCAACATGCAGTGGATTTCTACTCTGCCCTCTAT
>TU1970319
ctctggttctctggtagactgtagatactaaacatctgtcatgtctctggttctctggtagactgtagatactaaacatctgtcatgtctctggtagactgtagatactatatacctgtcatgtatctggtcctctggtagactgtagatactatacacctggCATGTCTCTGGTAGACTAGATACTATATACCTGTCATGtctctggtcctctggtagactgtagatactctacacctgtcatgtctctggtagactgtagatactaaacacctgtcatgtatctggtcctctggtagactgtagatactaaacacctgtcatgtctctggtcctctggtagactgtagatactctACACCTGGCATGTCTCTGGTTCTGAAGCTACTGTCACGGTGGAGGAGTTTTGAAATGCGTCAACATGCAGTGGATTTCTACTCTGCCCTCTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970320 False 981 lncRNA 0.43 3 24709915 24717545
TU1970319 True 450 lncRNA 0.44 2 24712667 24717545

Neighbor

gene id symbol gene type direction distance location
LOC110501038 NA coding upstream 52591 24653227 ~ 24657324 (+)
LOC110500922 LOC106576224 coding upstream 72360 24634677 ~ 24637555 (+)
mkln1 LOC106609349 coding upstream 106520 24575808 ~ 24603395 (+)
asb13a.2 LOC106609355 coding upstream 295736 24405619 ~ 24414681 (+)
asb13a.1 LOC106609354 coding upstream 304377 24401158 ~ 24405538 (+)
LOC110500113 LOC106609343 coding downstream 3423 24720968 ~ 24723685 (+)
LOC110500118 LOC106609342 coding downstream 69935 24787480 ~ 24791567 (+)
LOC110500123 NA coding downstream 1051341 25768886 ~ 25772881 (+)
LOC110500127 LOC106576199 coding downstream 1154276 25871821 ~ 25875841 (+)
LOC110500124 itih5 coding downstream 1174328 25891873 ~ 25907486 (+)
G1719695 NA non-coding upstream 115525 24530156 ~ 24594390 (+)
G1719705 NA non-coding upstream 144575 24564257 ~ 24565340 (+)
G1719657 NA non-coding upstream 214391 24495298 ~ 24495524 (+)
G1719647 LOC106609352 non-coding upstream 223620 24485663 ~ 24486295 (+)
G1719644 NA non-coding upstream 236556 24473049 ~ 24473359 (+)
LOC110500114 LOC106576221 non-coding downstream 25174 24659827 ~ 24744884 (+)
G1719811 NA non-coding downstream 37796 24755341 ~ 24756316 (+)
G1719862 NA non-coding downstream 114855 24832400 ~ 24833158 (+)
G1719826 NA non-coding downstream 157994 24875539 ~ 24935910 (+)
G1719893 NA non-coding downstream 165399 24882944 ~ 24883900 (+)
LOC110500097 LOC106576231 other upstream 392377 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 415118 24277797 ~ 24294858 (+)
G1719268 NA other upstream 573592 24135764 ~ 24136323 (+)
G1719225 NA other upstream 635467 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1453103 23256126 ~ 23256812 (+)
G1720836 NA other downstream 894271 25611816 ~ 25612268 (+)
G1720853 NA other downstream 918790 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1320757 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1612229 26324744 ~ 26333964 (+)
G1722079 NA other downstream 2104102 26821647 ~ 26821935 (+)

Expression


Co-expression Network