Gene
RNA
| Item | Value |
|---|---|
| gene id | G1719862 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 24832400 ~ 24833158 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1970402 | True | 353 | lncRNA | 0.41 | 2 | 24832400 | 24833158 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500118 | LOC106609342 | coding | upstream | 40833 | 24787480 ~ 24791567 (+) |
| LOC110500114 | LOC106576221 | coding | upstream | 87516 | 24659827 ~ 24744884 (+) |
| LOC110500113 | LOC106609343 | coding | upstream | 108715 | 24720968 ~ 24723685 (+) |
| LOC110501038 | NA | coding | upstream | 175076 | 24653227 ~ 24657324 (+) |
| LOC110500922 | LOC106576224 | coding | upstream | 194845 | 24634677 ~ 24637555 (+) |
| LOC110500123 | NA | coding | downstream | 935728 | 25768886 ~ 25772881 (+) |
| LOC110500127 | LOC106576199 | coding | downstream | 1038663 | 25871821 ~ 25875841 (+) |
| LOC110500124 | itih5 | coding | downstream | 1058715 | 25891873 ~ 25907486 (+) |
| sfmbt2 | LOC106576194 | coding | downstream | 1098432 | 25931590 ~ 25977279 (+) |
| LOC110500131 | prkcq | coding | downstream | 1154944 | 25988102 ~ 26012328 (+) |
| G1719811 | NA | non-coding | upstream | 76084 | 24755341 ~ 24756316 (+) |
| G1719795 | NA | non-coding | upstream | 114855 | 24709915 ~ 24717545 (+) |
| G1719695 | NA | non-coding | upstream | 238010 | 24530156 ~ 24594390 (+) |
| G1719705 | NA | non-coding | upstream | 267060 | 24564257 ~ 24565340 (+) |
| G1719826 | NA | non-coding | downstream | 42381 | 24875539 ~ 24935910 (+) |
| G1719893 | NA | non-coding | downstream | 49786 | 24882944 ~ 24883900 (+) |
| G1719895 | NA | non-coding | downstream | 57735 | 24890893 ~ 24896663 (+) |
| G1719913 | NA | non-coding | downstream | 85819 | 24918977 ~ 24924572 (+) |
| G1719973 | NA | non-coding | downstream | 192044 | 25025202 ~ 25025696 (+) |
| LOC110500097 | LOC106576231 | other | upstream | 514862 | 24315919 ~ 24321712 (+) |
| adm2a | LOC106609361 | other | upstream | 537603 | 24277797 ~ 24294858 (+) |
| G1719268 | NA | other | upstream | 696077 | 24135764 ~ 24136323 (+) |
| G1719225 | NA | other | upstream | 757952 | 24073405 ~ 24074448 (+) |
| G1717785 | NA | other | upstream | 1575588 | 23256126 ~ 23256812 (+) |
| G1720836 | NA | other | downstream | 778658 | 25611816 ~ 25612268 (+) |
| G1720853 | NA | other | downstream | 803177 | 25636335 ~ 25636589 (+) |
| G1721084 | pfkfb3 | other | downstream | 1205144 | 26038302 ~ 26041843 (+) |
| cep83 | LOC106609290 | other | downstream | 1496616 | 26324744 ~ 26333964 (+) |
| G1722079 | NA | other | downstream | 1988489 | 26821647 ~ 26821935 (+) |
