G1719893


Basic Information

Item Value
gene id G1719893
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 24882944 ~ 24883900 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970436
CTTTCTGGCTGCCGGCGGCACCTTGCTGCTGCAGCAGGGACTGGCTGTAGAGGGTGGGCAGGGCTGTGGCTGCATACTGCTGGATCCCTGAGTAGGCCTGTGTGAGCGCGTCCATGGTGCCCGCCGTGCCGTTGGTCAGCCCCGCGCCGCCCAGGCCTCCGTTCAGGGCCGCCATACCTGAGAGCATTTGTGCAACTTTACATAAAACCCAACAGTACAAAAAGAAGAGTGCACTTACTCATTAGAGCTCCACTGCAGGTTGTgtttaatcacacacacacttattatacatacagtacacactcattatacatacagtacacactcattcactcaacacacacacttattatacatacagtacacactcattcactcaacacacacacacacattatacatacagtacacactcattcactcaacacacacacacacactcattatacatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttaacagctcagtgaggttggatggagagcatttgtgaacagcagttttc

Function

NR:

description
CUGBP Elav-like family member 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970436 True 592 lncRNA 0.48 3 24882944 24883900

Neighbor

gene id symbol gene type direction distance location
LOC110500118 LOC106609342 coding upstream 91377 24787480 ~ 24791567 (+)
LOC110500114 LOC106576221 coding upstream 138060 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding upstream 159259 24720968 ~ 24723685 (+)
LOC110501038 NA coding upstream 225620 24653227 ~ 24657324 (+)
LOC110500922 LOC106576224 coding upstream 245389 24634677 ~ 24637555 (+)
LOC110500123 NA coding downstream 884986 25768886 ~ 25772881 (+)
LOC110500127 LOC106576199 coding downstream 987921 25871821 ~ 25875841 (+)
LOC110500124 itih5 coding downstream 1007973 25891873 ~ 25907486 (+)
sfmbt2 LOC106576194 coding downstream 1047690 25931590 ~ 25977279 (+)
LOC110500131 prkcq coding downstream 1104202 25988102 ~ 26012328 (+)
G1719862 NA non-coding upstream 49786 24832400 ~ 24833158 (+)
G1719811 NA non-coding upstream 126628 24755341 ~ 24756316 (+)
G1719795 NA non-coding upstream 165399 24709915 ~ 24717545 (+)
G1719705 NA non-coding upstream 317604 24564257 ~ 24565340 (+)
G1719895 NA non-coding downstream 6993 24890893 ~ 24896663 (+)
G1719913 NA non-coding downstream 35077 24918977 ~ 24924572 (+)
G1719973 NA non-coding downstream 141302 25025202 ~ 25025696 (+)
G1719979 NA non-coding downstream 148718 25032618 ~ 25032868 (+)
G1720016 NA non-coding downstream 208941 25092841 ~ 25093079 (+)
LOC110500097 LOC106576231 other upstream 565406 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 588147 24277797 ~ 24294858 (+)
G1719268 NA other upstream 746621 24135764 ~ 24136323 (+)
G1719225 NA other upstream 808496 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1626132 23256126 ~ 23256812 (+)
G1720836 NA other downstream 727916 25611816 ~ 25612268 (+)
G1720853 NA other downstream 752435 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1154402 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1445874 26324744 ~ 26333964 (+)
G1722079 NA other downstream 1937747 26821647 ~ 26821935 (+)

Expression


Co-expression Network