G1719979


Basic Information

Item Value
gene id G1719979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 25032618 ~ 25032868 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970528
TTTATCTTGTCCTCCCCTCACAGAGAGCATCAGCTGGAAGGAAAACATTCCTCTATCCCAGAGAACCCTGGGCCAGGGAGGGTGAGCAGGGGGGCAGGGGAGAGCCTGTCAAACCTGCTCTCATGTCTAGACTGGTTCATCAGCCCAATATGAGGGGGGAGGGTGGGATGGCAAGAtaagggggatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970528 True 251 lncRNA 0.55 1 25032618 25032868

Neighbor

gene id symbol gene type direction distance location
LOC110500118 LOC106609342 coding upstream 241051 24787480 ~ 24791567 (+)
LOC110500114 LOC106576221 coding upstream 287734 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding upstream 308933 24720968 ~ 24723685 (+)
LOC110501038 NA coding upstream 375294 24653227 ~ 24657324 (+)
LOC110500922 LOC106576224 coding upstream 395063 24634677 ~ 24637555 (+)
LOC110500123 NA coding downstream 736018 25768886 ~ 25772881 (+)
LOC110500127 LOC106576199 coding downstream 838953 25871821 ~ 25875841 (+)
LOC110500124 itih5 coding downstream 859005 25891873 ~ 25907486 (+)
sfmbt2 LOC106576194 coding downstream 898722 25931590 ~ 25977279 (+)
LOC110500131 prkcq coding downstream 955234 25988102 ~ 26012328 (+)
G1719973 NA non-coding upstream 6922 25025202 ~ 25025696 (+)
G1719826 NA non-coding upstream 96708 24875539 ~ 24935910 (+)
G1719913 NA non-coding upstream 108046 24918977 ~ 24924572 (+)
G1719895 NA non-coding upstream 135955 24890893 ~ 24896663 (+)
G1719893 NA non-coding upstream 148718 24882944 ~ 24883900 (+)
G1720016 NA non-coding downstream 59973 25092841 ~ 25093079 (+)
G1720017 NA non-coding downstream 60732 25093600 ~ 25093875 (+)
G1720018 NA non-coding downstream 61647 25094515 ~ 25094720 (+)
G1720021 NA non-coding downstream 65954 25098822 ~ 25099041 (+)
G1720022 NA non-coding downstream 67007 25099875 ~ 25100160 (+)
LOC110500097 LOC106576231 other upstream 715080 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 737821 24277797 ~ 24294858 (+)
G1719268 NA other upstream 896295 24135764 ~ 24136323 (+)
G1719225 NA other upstream 958170 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1775806 23256126 ~ 23256812 (+)
G1720836 NA other downstream 578948 25611816 ~ 25612268 (+)
G1720853 NA other downstream 603467 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 1005434 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1296906 26324744 ~ 26333964 (+)
G1722079 NA other downstream 1788779 26821647 ~ 26821935 (+)

Expression


Co-expression Network