G1720017


Basic Information

Item Value
gene id G1720017
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 25093600 ~ 25093875 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970566
ctcatattccctctctctctcatattccctcTTTcgctcatattctctctctctctcttattccctctctctctccaggggcaCCTCTCTGTTTCAGCCAAGCGGAGTAGAAAAGACACTGGGGTTTAAACAAAGCCTACTAGACTCCCTCTGTTAGACCCACATCTGGTTCCACCTCAGAAAACACACGAAAGAGGATttcgacacccaccatctcagattgttctgaaatcgtttctgtTTGGGTGCACTTGTTATCTGTAGTTTCTCTAACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970566 True 276 lncRNA 0.46 1 25093600 25093875

Neighbor

gene id symbol gene type direction distance location
LOC110500118 LOC106609342 coding upstream 302033 24787480 ~ 24791567 (+)
LOC110500114 LOC106576221 coding upstream 348716 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding upstream 369915 24720968 ~ 24723685 (+)
LOC110501038 NA coding upstream 436276 24653227 ~ 24657324 (+)
LOC110500922 LOC106576224 coding upstream 456045 24634677 ~ 24637555 (+)
LOC110500123 NA coding downstream 675011 25768886 ~ 25772881 (+)
LOC110500127 LOC106576199 coding downstream 777946 25871821 ~ 25875841 (+)
LOC110500124 itih5 coding downstream 797998 25891873 ~ 25907486 (+)
sfmbt2 LOC106576194 coding downstream 837715 25931590 ~ 25977279 (+)
LOC110500131 prkcq coding downstream 894227 25988102 ~ 26012328 (+)
G1720016 NA non-coding upstream 521 25092841 ~ 25093079 (+)
G1719979 NA non-coding upstream 60732 25032618 ~ 25032868 (+)
G1719973 NA non-coding upstream 67904 25025202 ~ 25025696 (+)
G1719913 NA non-coding upstream 169028 24918977 ~ 24924572 (+)
G1719895 NA non-coding upstream 196937 24890893 ~ 24896663 (+)
G1720018 NA non-coding downstream 640 25094515 ~ 25094720 (+)
G1720021 NA non-coding downstream 4947 25098822 ~ 25099041 (+)
G1720022 NA non-coding downstream 6000 25099875 ~ 25100160 (+)
G1720024 NA non-coding downstream 7316 25101191 ~ 25101429 (+)
G1720356 NA non-coding downstream 10460 25104335 ~ 25105131 (+)
LOC110500097 LOC106576231 other upstream 776062 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 798803 24277797 ~ 24294858 (+)
G1719268 NA other upstream 957277 24135764 ~ 24136323 (+)
G1719225 NA other upstream 1019152 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1836788 23256126 ~ 23256812 (+)
G1720836 NA other downstream 517941 25611816 ~ 25612268 (+)
G1720853 NA other downstream 542460 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 944427 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1235899 26324744 ~ 26333964 (+)
G1722079 NA other downstream 1727772 26821647 ~ 26821935 (+)

Expression


Co-expression Network