G1720024


Basic Information

Item Value
gene id G1720024
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 25101191 ~ 25101429 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970573
CAAAGATTCTCTATCACAGGAAAGACAGGAAATAGCCCCCGTAGAGAAACAGTGGGTCATCCTCCCCATCTTCACCTTTTAATGTGAGTGTGTACGGGTCAGTGCCACAAGCCATTTCATGCCCCAGGCTCCATGGGGCCATCACTATATAAGGCTAGACTGACATCATCCCGTCTTCACAGGCTCACAGTCACAGCAGCAATAAGCATGTTCTTTAGGGTTCCtgtgataaaaaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970573 True 239 lncRNA 0.47 1 25101191 25101429

Neighbor

gene id symbol gene type direction distance location
LOC110500118 LOC106609342 coding upstream 309624 24787480 ~ 24791567 (+)
LOC110500114 LOC106576221 coding upstream 356307 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding upstream 377506 24720968 ~ 24723685 (+)
LOC110501038 NA coding upstream 443867 24653227 ~ 24657324 (+)
LOC110500922 LOC106576224 coding upstream 463636 24634677 ~ 24637555 (+)
LOC110500123 NA coding downstream 667457 25768886 ~ 25772881 (+)
LOC110500127 LOC106576199 coding downstream 770392 25871821 ~ 25875841 (+)
LOC110500124 itih5 coding downstream 790444 25891873 ~ 25907486 (+)
sfmbt2 LOC106576194 coding downstream 830161 25931590 ~ 25977279 (+)
LOC110500131 prkcq coding downstream 886673 25988102 ~ 26012328 (+)
G1720022 NA non-coding upstream 1031 25099875 ~ 25100160 (+)
G1720021 NA non-coding upstream 2150 25098822 ~ 25099041 (+)
G1720018 NA non-coding upstream 6471 25094515 ~ 25094720 (+)
G1720017 NA non-coding upstream 7316 25093600 ~ 25093875 (+)
G1720016 NA non-coding upstream 8112 25092841 ~ 25093079 (+)
G1720356 NA non-coding downstream 2906 25104335 ~ 25105131 (+)
G1720358 NA non-coding downstream 4444 25105873 ~ 25106116 (+)
G1720377 NA non-coding downstream 21759 25123188 ~ 25123425 (+)
G1720384 NA non-coding downstream 26294 25127723 ~ 25127935 (+)
G1720437 NA non-coding downstream 98342 25199771 ~ 25200111 (+)
LOC110500097 LOC106576231 other upstream 783653 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 806394 24277797 ~ 24294858 (+)
G1719268 NA other upstream 964868 24135764 ~ 24136323 (+)
G1719225 NA other upstream 1026743 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1844379 23256126 ~ 23256812 (+)
G1720836 NA other downstream 510387 25611816 ~ 25612268 (+)
G1720853 NA other downstream 534906 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 936873 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1228345 26324744 ~ 26333964 (+)
G1722079 NA other downstream 1720218 26821647 ~ 26821935 (+)

Expression


Co-expression Network