G1720384


Basic Information

Item Value
gene id G1720384
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 25127723 ~ 25127935 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1970985
actttattttaagaatgtgaaatttcagaataatagtagagagaatgatttatttcagatttgatttctttcatcacattcccagtgggtcagaagtttacatacactcaattagtatttggtagcattgcctttaaattgtttaacttggttcaaacattttgggtagccttccacaagcttcccacaataagttgggtgaattttggccca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1970985 True 213 lncRNA 0.33 1 25127723 25127935

Neighbor

gene id symbol gene type direction distance location
LOC110500118 LOC106609342 coding upstream 336156 24787480 ~ 24791567 (+)
LOC110500114 LOC106576221 coding upstream 382839 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding upstream 404038 24720968 ~ 24723685 (+)
LOC110501038 NA coding upstream 470399 24653227 ~ 24657324 (+)
LOC110500922 LOC106576224 coding upstream 490168 24634677 ~ 24637555 (+)
LOC110500123 NA coding downstream 640951 25768886 ~ 25772881 (+)
LOC110500127 LOC106576199 coding downstream 743886 25871821 ~ 25875841 (+)
LOC110500124 itih5 coding downstream 763938 25891873 ~ 25907486 (+)
sfmbt2 LOC106576194 coding downstream 803655 25931590 ~ 25977279 (+)
LOC110500131 prkcq coding downstream 860167 25988102 ~ 26012328 (+)
G1720377 NA non-coding upstream 4298 25123188 ~ 25123425 (+)
G1720358 NA non-coding upstream 21607 25105873 ~ 25106116 (+)
G1720356 NA non-coding upstream 22592 25104335 ~ 25105131 (+)
G1720024 NA non-coding upstream 26294 25101191 ~ 25101429 (+)
G1720022 NA non-coding upstream 27563 25099875 ~ 25100160 (+)
G1720437 NA non-coding downstream 71836 25199771 ~ 25200111 (+)
G1720464 NA non-coding downstream 113173 25241108 ~ 25241320 (+)
G1720484 NA non-coding downstream 119349 25247284 ~ 25247575 (+)
G1720586 NA non-coding downstream 246617 25374552 ~ 25454477 (+)
G1720589 NA non-coding downstream 252536 25380471 ~ 25382216 (+)
LOC110500097 LOC106576231 other upstream 810185 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 832926 24277797 ~ 24294858 (+)
G1719268 NA other upstream 991400 24135764 ~ 24136323 (+)
G1719225 NA other upstream 1053275 24073405 ~ 24074448 (+)
G1717785 NA other upstream 1870911 23256126 ~ 23256812 (+)
G1720836 NA other downstream 483881 25611816 ~ 25612268 (+)
G1720853 NA other downstream 508400 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 910367 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 1201839 26324744 ~ 26333964 (+)
G1722079 NA other downstream 1693712 26821647 ~ 26821935 (+)

Expression


Co-expression Network