G1720838


Basic Information

Item Value
gene id G1720838
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 25613899 ~ 25614210 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1971495
tcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaatggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtaaatcataAATCTCTCTgttattattctggcatttcacattcccctaaataaagtggtgatcctaactgacctaagacagggaattttttactaggattaaatgtcaggaattgtgaaaaactgagattaaatgcatttggctaaaatgtatgtaaacttccgacttcaacggtaTATATAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1971495 True 312 lncRNA 0.35 1 25613899 25614210

Neighbor

gene id symbol gene type direction distance location
LOC110500118 LOC106609342 coding upstream 822332 24787480 ~ 24791567 (+)
LOC110500114 LOC106576221 coding upstream 869015 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding upstream 890214 24720968 ~ 24723685 (+)
LOC110501038 NA coding upstream 956575 24653227 ~ 24657324 (+)
LOC110500922 LOC106576224 coding upstream 976344 24634677 ~ 24637555 (+)
LOC110500123 NA coding downstream 154676 25768886 ~ 25772881 (+)
LOC110500127 LOC106576199 coding downstream 257611 25871821 ~ 25875841 (+)
LOC110500124 itih5 coding downstream 277663 25891873 ~ 25907486 (+)
sfmbt2 LOC106576194 coding downstream 317380 25931590 ~ 25977279 (+)
LOC110500131 prkcq coding downstream 373892 25988102 ~ 26012328 (+)
G1720766 NA non-coding upstream 96634 25501513 ~ 25517265 (+)
G1720586 NA non-coding upstream 159422 25374552 ~ 25454477 (+)
G1720607 NA non-coding upstream 200823 25409457 ~ 25413076 (+)
G1720589 NA non-coding upstream 231683 25380471 ~ 25382216 (+)
G1720484 NA non-coding upstream 366324 25247284 ~ 25247575 (+)
G1720857 NA non-coding downstream 31059 25645269 ~ 25645821 (+)
G1720860 NA non-coding downstream 32232 25646442 ~ 25654842 (+)
G1720869 NA non-coding downstream 48595 25662805 ~ 25664431 (+)
G1720892 NA non-coding downstream 76415 25690625 ~ 25691013 (+)
G1720899 NA non-coding downstream 83117 25697327 ~ 25697538 (+)
G1720836 NA other upstream 1631 25611816 ~ 25612268 (+)
LOC110500097 LOC106576231 other upstream 1296361 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 1319102 24277797 ~ 24294858 (+)
G1719268 NA other upstream 1477576 24135764 ~ 24136323 (+)
G1719225 NA other upstream 1539451 24073405 ~ 24074448 (+)
G1720853 NA other downstream 22125 25636335 ~ 25636589 (+)
G1721084 pfkfb3 other downstream 424092 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 715564 26324744 ~ 26333964 (+)
G1722079 NA other downstream 1207437 26821647 ~ 26821935 (+)
LOC110501048 LOC106609163 other downstream 2708310 28311018 ~ 28335924 (+)

Expression


Co-expression Network