G1720857



Basic Information


Item Value
gene id G1720857
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 25645269 ~ 25645821 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1971519
GACTAGAACatcccagtcaggtagatgtattgtactgtctagactagaacaacccagttatatgaatgtactgtgctgtatAGGCTAGAAAAAACCAGTCAGGTCTATGTACTGTGCTGTCTAGACTAGAACGACCCAGTCAGgtagatgtactgtgctgtctagactagaacaacccagtcaggtagatgtactatGTTGTATaggctagaacaacccagtcGGGGAGATGTACTATGTTGTATaggctagaacaacccagtcaggtagat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1971519 True 272 lncRNA 0.43 3 25645269 25645821

Neighbor


gene id symbol gene type direction distance location
LOC110500118 LOC106609342 coding upstream 853702 24787480 ~ 24791567 (+)
LOC110500114 LOC106576221 coding upstream 900385 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding upstream 921584 24720968 ~ 24723685 (+)
LOC110501038 NA coding upstream 987945 24653227 ~ 24657324 (+)
LOC110500922 LOC106576224 coding upstream 1007714 24634677 ~ 24637555 (+)
LOC110500123 NA coding downstream 123065 25768886 ~ 25772881 (+)
LOC110500127 LOC106576199 coding downstream 226000 25871821 ~ 25875841 (+)
LOC110500124 itih5 coding downstream 246052 25891873 ~ 25907486 (+)
sfmbt2 LOC106576194 coding downstream 285769 25931590 ~ 25977279 (+)
LOC110500131 prkcq coding downstream 342281 25988102 ~ 26012328 (+)
G1720838 NA non-coding upstream 31059 25613899 ~ 25614210 (+)
G1720766 NA non-coding upstream 128004 25501513 ~ 25517265 (+)
G1720586 NA non-coding upstream 190792 25374552 ~ 25454477 (+)
G1720607 NA non-coding upstream 232193 25409457 ~ 25413076 (+)
G1720589 NA non-coding upstream 263053 25380471 ~ 25382216 (+)
G1720860 NA non-coding downstream 621 25646442 ~ 25654842 (+)
G1720869 NA non-coding downstream 16984 25662805 ~ 25664431 (+)
G1720892 NA non-coding downstream 44804 25690625 ~ 25691013 (+)
G1720899 NA non-coding downstream 51506 25697327 ~ 25697538 (+)
G1720908 NA non-coding downstream 59460 25705281 ~ 25705507 (+)
G1720853 NA other upstream 8680 25636335 ~ 25636589 (+)
G1720836 NA other upstream 33001 25611816 ~ 25612268 (+)
LOC110500097 LOC106576231 other upstream 1327731 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 1350472 24277797 ~ 24294858 (+)
G1719268 NA other upstream 1508946 24135764 ~ 24136323 (+)
G1721084 pfkfb3 other downstream 392481 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 683953 26324744 ~ 26333964 (+)
G1722079 NA other downstream 1175826 26821647 ~ 26821935 (+)
LOC110501048 LOC106609163 other downstream 2676699 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 other downstream 2695680 28341423 ~ 28343734 (+)

Expression



Co-expression Network