Gene
RNA
| Item | Value |
|---|---|
| gene id | G1720860 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 25646442 ~ 25654842 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1971522 | True | 394 | lncRNA | 0.38 | 2 | 25646442 | 25654842 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500118 | LOC106609342 | coding | upstream | 854875 | 24787480 ~ 24791567 (+) |
| LOC110500114 | LOC106576221 | coding | upstream | 901558 | 24659827 ~ 24744884 (+) |
| LOC110500113 | LOC106609343 | coding | upstream | 922757 | 24720968 ~ 24723685 (+) |
| LOC110501038 | NA | coding | upstream | 989118 | 24653227 ~ 24657324 (+) |
| LOC110500922 | LOC106576224 | coding | upstream | 1008887 | 24634677 ~ 24637555 (+) |
| LOC110500123 | NA | coding | downstream | 114044 | 25768886 ~ 25772881 (+) |
| LOC110500127 | LOC106576199 | coding | downstream | 216979 | 25871821 ~ 25875841 (+) |
| LOC110500124 | itih5 | coding | downstream | 237031 | 25891873 ~ 25907486 (+) |
| sfmbt2 | LOC106576194 | coding | downstream | 276748 | 25931590 ~ 25977279 (+) |
| LOC110500131 | prkcq | coding | downstream | 333260 | 25988102 ~ 26012328 (+) |
| G1720857 | NA | non-coding | upstream | 621 | 25645269 ~ 25645821 (+) |
| G1720838 | NA | non-coding | upstream | 32232 | 25613899 ~ 25614210 (+) |
| G1720766 | NA | non-coding | upstream | 129177 | 25501513 ~ 25517265 (+) |
| G1720586 | NA | non-coding | upstream | 191965 | 25374552 ~ 25454477 (+) |
| G1720869 | NA | non-coding | downstream | 7963 | 25662805 ~ 25664431 (+) |
| G1720892 | NA | non-coding | downstream | 35783 | 25690625 ~ 25691013 (+) |
| G1720899 | NA | non-coding | downstream | 42485 | 25697327 ~ 25697538 (+) |
| G1720908 | NA | non-coding | downstream | 50439 | 25705281 ~ 25705507 (+) |
| G1720911 | NA | non-coding | downstream | 53367 | 25708209 ~ 25729598 (+) |
| G1720853 | NA | other | upstream | 9853 | 25636335 ~ 25636589 (+) |
| G1720836 | NA | other | upstream | 34174 | 25611816 ~ 25612268 (+) |
| LOC110500097 | LOC106576231 | other | upstream | 1328904 | 24315919 ~ 24321712 (+) |
| adm2a | LOC106609361 | other | upstream | 1351645 | 24277797 ~ 24294858 (+) |
| G1719268 | NA | other | upstream | 1510119 | 24135764 ~ 24136323 (+) |
| G1721084 | pfkfb3 | other | downstream | 383460 | 26038302 ~ 26041843 (+) |
| cep83 | LOC106609290 | other | downstream | 674932 | 26324744 ~ 26333964 (+) |
| G1722079 | NA | other | downstream | 1166805 | 26821647 ~ 26821935 (+) |
| LOC110501048 | LOC106609163 | other | downstream | 2667678 | 28311018 ~ 28335924 (+) |
| LOC110500183 | LOC106609180 | other | downstream | 2686659 | 28341423 ~ 28343734 (+) |
