Gene
RNA
| Item | Value |
|---|---|
| gene id | G1720869 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 25662805 ~ 25664431 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1971533 | True | 375 | lncRNA | 0.41 | 2 | 25662805 | 25664431 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500118 | LOC106609342 | coding | upstream | 871238 | 24787480 ~ 24791567 (+) |
| LOC110500114 | LOC106576221 | coding | upstream | 917921 | 24659827 ~ 24744884 (+) |
| LOC110500113 | LOC106609343 | coding | upstream | 939120 | 24720968 ~ 24723685 (+) |
| LOC110501038 | NA | coding | upstream | 1005481 | 24653227 ~ 24657324 (+) |
| LOC110500922 | LOC106576224 | coding | upstream | 1025250 | 24634677 ~ 24637555 (+) |
| LOC110500123 | NA | coding | downstream | 104455 | 25768886 ~ 25772881 (+) |
| LOC110500127 | LOC106576199 | coding | downstream | 207390 | 25871821 ~ 25875841 (+) |
| LOC110500124 | itih5 | coding | downstream | 227442 | 25891873 ~ 25907486 (+) |
| sfmbt2 | LOC106576194 | coding | downstream | 267159 | 25931590 ~ 25977279 (+) |
| LOC110500131 | prkcq | coding | downstream | 323671 | 25988102 ~ 26012328 (+) |
| G1720860 | NA | non-coding | upstream | 7963 | 25646442 ~ 25654842 (+) |
| G1720857 | NA | non-coding | upstream | 16984 | 25645269 ~ 25645821 (+) |
| G1720838 | NA | non-coding | upstream | 48595 | 25613899 ~ 25614210 (+) |
| G1720766 | NA | non-coding | upstream | 145540 | 25501513 ~ 25517265 (+) |
| G1720607 | NA | non-coding | upstream | 249729 | 25409457 ~ 25413076 (+) |
| G1720892 | NA | non-coding | downstream | 26194 | 25690625 ~ 25691013 (+) |
| G1720899 | NA | non-coding | downstream | 32896 | 25697327 ~ 25697538 (+) |
| G1720908 | NA | non-coding | downstream | 40850 | 25705281 ~ 25705507 (+) |
| G1720911 | NA | non-coding | downstream | 43778 | 25708209 ~ 25729598 (+) |
| G1720932 | NA | non-coding | downstream | 71353 | 25735784 ~ 25735996 (+) |
| G1720853 | NA | other | upstream | 26216 | 25636335 ~ 25636589 (+) |
| G1720836 | NA | other | upstream | 50537 | 25611816 ~ 25612268 (+) |
| LOC110500097 | LOC106576231 | other | upstream | 1345267 | 24315919 ~ 24321712 (+) |
| adm2a | LOC106609361 | other | upstream | 1368008 | 24277797 ~ 24294858 (+) |
| G1719268 | NA | other | upstream | 1526482 | 24135764 ~ 24136323 (+) |
| G1721084 | pfkfb3 | other | downstream | 373871 | 26038302 ~ 26041843 (+) |
| cep83 | LOC106609290 | other | downstream | 665343 | 26324744 ~ 26333964 (+) |
| G1722079 | NA | other | downstream | 1157216 | 26821647 ~ 26821935 (+) |
| LOC110501048 | LOC106609163 | other | downstream | 2658089 | 28311018 ~ 28335924 (+) |
| LOC110500183 | LOC106609180 | other | downstream | 2677070 | 28341423 ~ 28343734 (+) |
