G1720899


Basic Information

Item Value
gene id G1720899
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 25697327 ~ 25697538 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1971565
GTACAGAAGTACTGTAATAACAGAGACAATCTGAGGATAAGCTTCTGTCTTTGTGATAAGGCATTTATAGACCGCCTACATTGATTTATTTGCAATGTGTCATATAACCTAGATCTACCACCCAGAATGGAAAATGATCCAAATATAGGGCTACATAGATTCAGTTGTAATGTATCATCACATATCTAGGCCTACGCAGCTTGGGCTAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1971565 True 212 lncRNA 0.37 1 25697327 25697538

Neighbor

gene id symbol gene type direction distance location
LOC110500118 LOC106609342 coding upstream 905760 24787480 ~ 24791567 (+)
LOC110500114 LOC106576221 coding upstream 952443 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding upstream 973642 24720968 ~ 24723685 (+)
LOC110501038 NA coding upstream 1040003 24653227 ~ 24657324 (+)
LOC110500922 LOC106576224 coding upstream 1059772 24634677 ~ 24637555 (+)
LOC110500123 NA coding downstream 71348 25768886 ~ 25772881 (+)
LOC110500127 LOC106576199 coding downstream 174283 25871821 ~ 25875841 (+)
LOC110500124 itih5 coding downstream 194335 25891873 ~ 25907486 (+)
sfmbt2 LOC106576194 coding downstream 234052 25931590 ~ 25977279 (+)
LOC110500131 prkcq coding downstream 290564 25988102 ~ 26012328 (+)
G1720892 NA non-coding upstream 6314 25690625 ~ 25691013 (+)
G1720869 NA non-coding upstream 32896 25662805 ~ 25664431 (+)
G1720860 NA non-coding upstream 42485 25646442 ~ 25654842 (+)
G1720857 NA non-coding upstream 51506 25645269 ~ 25645821 (+)
G1720838 NA non-coding upstream 83117 25613899 ~ 25614210 (+)
G1720908 NA non-coding downstream 7743 25705281 ~ 25705507 (+)
G1720911 NA non-coding downstream 10671 25708209 ~ 25729598 (+)
G1720932 NA non-coding downstream 38246 25735784 ~ 25735996 (+)
G1720934 NA non-coding downstream 39234 25736772 ~ 25736982 (+)
G1720951 NA non-coding downstream 57462 25755000 ~ 25755211 (+)
G1720853 NA other upstream 60738 25636335 ~ 25636589 (+)
G1720836 NA other upstream 85059 25611816 ~ 25612268 (+)
LOC110500097 LOC106576231 other upstream 1379789 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 1402530 24277797 ~ 24294858 (+)
G1719268 NA other upstream 1561004 24135764 ~ 24136323 (+)
G1721084 pfkfb3 other downstream 340764 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 632236 26324744 ~ 26333964 (+)
G1722079 NA other downstream 1124109 26821647 ~ 26821935 (+)
LOC110501048 LOC106609163 other downstream 2624982 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 other downstream 2643963 28341423 ~ 28343734 (+)

Expression


Co-expression Network