G1721004



Basic Information


Item Value
gene id G1721004
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 25846603 ~ 25846830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1971684
gagctaaacagttcacatcacctgcaaaactcattccaagcaacacaactcttaacacatggctcaaaacacgctcagtgcagccaaacactatgcacaaccctcactgagataacacacactgtcactcagaacacactgagagtaaaaacactagcatcaaacaccaatacagaaaatacaaacttttcatctttacagtttgaacaatttcagtgactgcataca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1971684 True 228 lncRNA 0.40 1 25846603 25846830

Neighbor


gene id symbol gene type direction distance location
LOC110500123 NA coding upstream 73722 25768886 ~ 25772881 (+)
LOC110500118 LOC106609342 coding upstream 1055036 24787480 ~ 24791567 (+)
LOC110500114 LOC106576221 coding upstream 1101719 24659827 ~ 24744884 (+)
LOC110500113 LOC106609343 coding upstream 1122918 24720968 ~ 24723685 (+)
LOC110501038 NA coding upstream 1189279 24653227 ~ 24657324 (+)
LOC110500127 LOC106576199 coding downstream 24991 25871821 ~ 25875841 (+)
LOC110500124 itih5 coding downstream 45043 25891873 ~ 25907486 (+)
sfmbt2 LOC106576194 coding downstream 84760 25931590 ~ 25977279 (+)
LOC110500131 prkcq coding downstream 141272 25988102 ~ 26012328 (+)
il15ra LOC100136332 coding downstream 216986 26063816 ~ 26121228 (+)
G1721002 NA non-coding upstream 10137 25836256 ~ 25836466 (+)
G1720953 NA non-coding upstream 81053 25763790 ~ 25765550 (+)
G1720951 NA non-coding upstream 91392 25755000 ~ 25755211 (+)
G1720934 NA non-coding upstream 109621 25736772 ~ 25736982 (+)
G1720932 NA non-coding upstream 110607 25735784 ~ 25735996 (+)
G1721005 NA non-coding downstream 1303 25848133 ~ 25848463 (+)
G1721016 NA non-coding downstream 12398 25859228 ~ 25859428 (+)
G1721011 atp5c1 non-coding downstream 19766 25866596 ~ 25868044 (+)
G1721010 LOC106576198 non-coding downstream 30086 25876916 ~ 25884807 (+)
G1721050 NA non-coding downstream 127732 25974562 ~ 25975664 (+)
G1720853 NA other upstream 210014 25636335 ~ 25636589 (+)
G1720836 NA other upstream 234335 25611816 ~ 25612268 (+)
LOC110500097 LOC106576231 other upstream 1529065 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 1551806 24277797 ~ 24294858 (+)
G1719268 NA other upstream 1710280 24135764 ~ 24136323 (+)
G1721084 pfkfb3 other downstream 191472 26038302 ~ 26041843 (+)
cep83 LOC106609290 other downstream 482944 26324744 ~ 26333964 (+)
G1722079 NA other downstream 974817 26821647 ~ 26821935 (+)
LOC110501048 LOC106609163 other downstream 2475690 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 other downstream 2494671 28341423 ~ 28343734 (+)

Expression



Co-expression Network