G1721435


Basic Information

Item Value
gene id G1721435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 25864514 ~ 25951098 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1972191
cattatattctctggcaacagctctggtCGACATCCCTgaagtcagcataccaattgcacgctccctcaaaacttgagacatctgtggaattgggttgggtgataaaactgcacattttagagtggccgtctgtccccagcacacggtgcacctgtgtaagggtcatgctgtttaatcagcttgatatgccacacctgtcaggtggagaatgctcactaacagggatttgtgcacaaaatttgaaagatatgttttttgtttgtacgGAAACGTTCTAcgttcttttatttcagctcatgaaacgggaccactttacatgttgcgtttatatatttgcTCAGTATAGATCTGTATTTTTCAACACGTAGATATTCTATGTAACAAAGAAACAATGAATGAACTGGTTATTCAACGAGTTTGTGTGATATCTACTGTATAGCCAGCCCATCTGCATGTATCAATATTGTTCTCCCACTGTCCAGTGAGAAAGTAACTGTGTTGTCAAAAACAGTCAATGGTAATGTTTATGTTGGTCATTTTGTTGCGGAACTTGATTCTACGACTGAAATGGGATGAAAGGTTAAGTACCCTTTTCATTGATGGTATCCGGGGCTGCAATGTTTCGTCTGTTCATTTATGAACAGTGCAGCCCATACAAAATGTAGCCACTATGTAACCAATGAgttattaaagatgtataaacCATCTATACTTGTTAACCTATTGCTATAAGACCTGTATAAAGGGTTCTCATTATTCCTGTTATTTCAAtagtttttgttgttgctgtagtAGGCCTTGTAAGCGGTGTTAGTTTAGTGATATCAGATGACTCCTGCTTAGCAGCAGAGTCTCAGCCCAGCGTCTTAGAAAAATAAAGCCTGATGCGATTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1972191 True 894 lncRNA 0.40 2 25864514 25951098

Neighbor

gene id symbol gene type direction distance location
LOC110500122 gata3 coding downstream 90203 25756791 ~ 25774311 (-)
LOC110501039 LOC106609337 coding downstream 761237 24875385 ~ 25103277 (-)
LOC110500116 LOC106609340 coding downstream 1006574 24793606 ~ 24857940 (-)
slc41a2b LOC106609341 coding downstream 1077067 24754781 ~ 24787447 (-)
LOC110500112 LOC106609347 coding downstream 1217294 24643955 ~ 24647220 (-)
pfkfb3 pfkfb3 coding upstream 87191 26038289 ~ 26047407 (-)
LOC110500134 rbm17 coding upstream 98114 26049212 ~ 26062404 (-)
LOC110500924 fbxo18 coding upstream 153086 26104184 ~ 26107320 (-)
fbxo18 fbxo18 coding upstream 161044 26112142 ~ 26134120 (-)
LOC110500138 LOC106609278 coding upstream 183113 26134211 ~ 26137955 (-)
G1721438 NA non-coding downstream 38413 25825870 ~ 25826101 (-)
G1721422 NA non-coding downstream 52758 25793171 ~ 25811756 (-)
G1721426 NA non-coding downstream 57447 25796367 ~ 25807067 (-)
G1721423 NA non-coding downstream 73749 25788563 ~ 25790765 (-)
G1720966 NA non-coding downstream 109932 25754365 ~ 25754582 (-)
G1721523 NA non-coding upstream 26760 25977858 ~ 25978101 (-)
G1721553 NA non-coding upstream 71080 26022178 ~ 26025907 (-)
G1721575 NA non-coding upstream 137570 26088668 ~ 26089567 (-)
G1721578 NA non-coding upstream 145158 26096256 ~ 26097329 (-)
G1721577 NA non-coding upstream 148757 26099855 ~ 26100218 (-)
G1719407 NA other downstream 1719166 24137726 ~ 24145348 (-)
LOC110500092 LOC106609371 other downstream 1798164 24060587 ~ 24066411 (-)
LOC110500089 LOC106609371 other downstream 1820886 24037871 ~ 24043628 (-)
G1718713 NA other downstream 2281664 23582575 ~ 23582850 (-)
LOC110500069 LOC106609440 other downstream 2287764 23574474 ~ 23586547 (-)
LOC110500148 LOC106609286 other upstream 350644 26301474 ~ 26310640 (-)
LOC110501044 LOC106609327 other upstream 1974319 27924301 ~ 27929621 (-)
LOC110501045 LOC106609328 other upstream 2131715 28002248 ~ 28103013 (-)
G1723535 NA other upstream 2279425 28230523 ~ 28230880 (-)
G1723713 utp20 other upstream 2418520 28369618 ~ 28371062 (-)

Expression

G1721435 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
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G1721435 Expression in each Bioproject

Bar chart with 21 bars.
G1721435 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
End of interactive chart.

Co-expression Network