Gene
RNA
| Item | Value |
|---|---|
| gene id | G1721050 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 25974562 ~ 25975664 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1971745 | True | 316 | lncRNA | 0.44 | 3 | 25974562 | 25975664 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500124 | itih5 | coding | upstream | 67076 | 25891873 ~ 25907486 (+) |
| LOC110500127 | LOC106576199 | coding | upstream | 98721 | 25871821 ~ 25875841 (+) |
| LOC110500123 | NA | coding | upstream | 201681 | 25768886 ~ 25772881 (+) |
| LOC110500118 | LOC106609342 | coding | upstream | 1182995 | 24787480 ~ 24791567 (+) |
| LOC110500114 | LOC106576221 | coding | upstream | 1229678 | 24659827 ~ 24744884 (+) |
| LOC110500131 | prkcq | coding | downstream | 12438 | 25988102 ~ 26012328 (+) |
| il15ra | LOC100136332 | coding | downstream | 88152 | 26063816 ~ 26121228 (+) |
| cdc123 | LOC106576189 | coding | downstream | 162427 | 26138091 ~ 26147264 (+) |
| camk1da | LOC106576188 | coding | downstream | 173091 | 26148755 ~ 26217898 (+) |
| LOC110500144 | optn | coding | downstream | 253312 | 26228976 ~ 26237213 (+) |
| G1721010 | LOC106576198 | non-coding | upstream | 89755 | 25876916 ~ 25884807 (+) |
| G1721011 | atp5c1 | non-coding | upstream | 106518 | 25866596 ~ 25868044 (+) |
| G1721016 | NA | non-coding | upstream | 115134 | 25859228 ~ 25859428 (+) |
| G1721005 | NA | non-coding | upstream | 126099 | 25848133 ~ 25848463 (+) |
| G1721004 | NA | non-coding | upstream | 127732 | 25846603 ~ 25846830 (+) |
| G1721087 | pfkfb3 | non-coding | downstream | 66244 | 26041908 ~ 26043103 (+) |
| G1721125 | NA | non-coding | downstream | 130277 | 26105941 ~ 26106170 (+) |
| G1721126 | NA | non-coding | downstream | 131115 | 26106779 ~ 26107037 (+) |
| G1721128 | NA | non-coding | downstream | 132195 | 26107859 ~ 26126990 (+) |
| G1720853 | NA | other | upstream | 337973 | 25636335 ~ 25636589 (+) |
| G1720836 | NA | other | upstream | 362294 | 25611816 ~ 25612268 (+) |
| LOC110500097 | LOC106576231 | other | upstream | 1657024 | 24315919 ~ 24321712 (+) |
| adm2a | LOC106609361 | other | upstream | 1679765 | 24277797 ~ 24294858 (+) |
| G1719268 | NA | other | upstream | 1838239 | 24135764 ~ 24136323 (+) |
| G1721084 | pfkfb3 | other | downstream | 62638 | 26038302 ~ 26041843 (+) |
| cep83 | LOC106609290 | other | downstream | 354110 | 26324744 ~ 26333964 (+) |
| G1722079 | NA | other | downstream | 845983 | 26821647 ~ 26821935 (+) |
| LOC110501048 | LOC106609163 | other | downstream | 2346856 | 28311018 ~ 28335924 (+) |
| LOC110500183 | LOC106609180 | other | downstream | 2365837 | 28341423 ~ 28343734 (+) |
