G1721087 (pfkfb3)


Basic Information

Item Value
gene id G1721087
gene name pfkfb3
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 26041908 ~ 26043103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1971783
CCTCACCTTATTTCTCCTGCCCTGGACAAGCTAGAGAACATACAATTGACCCTAATGCCCAATTCACACTATAGAGCCAATCTGAACTGTACTATTCTGTCTCTGATATTTTCTGGTCACATTGGCTTGGCTCGGTAATGTGAGAAGTGTACACAAGTTCTCACCGTAGGCAATGGGGGTGAGCTTCAGCACCGTGTGGAGGGGACACTTCAGGTAGGGCATCTCTTCTGCACTCTTATCCAGGAAGTAAGCCAGGAGACAGCGCATCACAGCCTGGTGACAGATAACCAGAACGTTCTCCTGTCTCTCCAGCTCCATGATCACTGGCTCCACCCGCTGGACCAGGTCCTGAtaggaCTCTCCTGTGGGGTAGCGGTAGTAATACTTGTCCTGGTCTCTCAGAGCAAACTCCTCAGGGTACTTCTCCTTCACCTCATCGTACGTCATCTCCTCACACACCCCagcGTCTATCTCGTTAAGGGCCTTCCACTGTTCGTAGGGCACTCCCAGGCTCTCAGCAGTCTGGATGCTGCAACACATCTGATTGGTCCACACCTTCAGATCCGTCAAGTTCTGCTCTTTAACAAACATTGACAACGCCCCAGAAAACTTTCTCCCCCTTGGCGACAGCCCTGAGTCTCCCCCCAGGCGTCCCTGCAGGTTGTGCATGCTCTCTCCATGGCGACACAGGTAGATGACTCTGGGCTGGACGTGGATGTTCATCAGGTAGTAGACAATCTTACTCTGGACGTGGTCCTGGATCCGGTTCACCAGGAACCTTCTGCCTACATCTATCACCTTGATGAAGGACA

Function

symbol description
pfkfb3 Predicted to enable 6-phosphofructo-2-kinase activity and fructose-2,6-bisphosphate 2-phosphatase activity. Predicted to be involved in fructose 2,6-bisphosphate metabolic process. Predicted to act upstream of or within fructose metabolic process and phosphorylation. Predicted to be active in cytosol. Is expressed in Purkinje cell. Orthologous to human PFKFB3 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3).

NR:

description
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1971783 True 812 lncRNA 0.52 4 26041908 26043103

Neighbor

gene id symbol gene type direction distance location
LOC110500131 prkcq coding upstream 29580 25988102 ~ 26012328 (+)
sfmbt2 LOC106576194 coding upstream 64629 25931590 ~ 25977279 (+)
LOC110500124 itih5 coding upstream 134422 25891873 ~ 25907486 (+)
LOC110500127 LOC106576199 coding upstream 166067 25871821 ~ 25875841 (+)
LOC110500123 NA coding upstream 269027 25768886 ~ 25772881 (+)
il15ra LOC100136332 coding downstream 20713 26063816 ~ 26121228 (+)
cdc123 LOC106576189 coding downstream 94988 26138091 ~ 26147264 (+)
camk1da LOC106576188 coding downstream 105652 26148755 ~ 26217898 (+)
LOC110500144 optn coding downstream 185873 26228976 ~ 26237213 (+)
mcm10 mcm10 coding downstream 194906 26238009 ~ 26247743 (+)
G1721050 NA non-coding upstream 66244 25974562 ~ 25975664 (+)
G1721010 LOC106576198 non-coding upstream 157101 25876916 ~ 25884807 (+)
G1721011 atp5c1 non-coding upstream 173864 25866596 ~ 25868044 (+)
G1721016 NA non-coding upstream 182480 25859228 ~ 25859428 (+)
G1721005 NA non-coding upstream 193445 25848133 ~ 25848463 (+)
G1721125 NA non-coding downstream 62838 26105941 ~ 26106170 (+)
G1721126 NA non-coding downstream 63676 26106779 ~ 26107037 (+)
G1721128 NA non-coding downstream 64756 26107859 ~ 26126990 (+)
G1721131 fbxo18 non-coding downstream 87676 26130779 ~ 26132124 (+)
G1721084 pfkfb3 other upstream 65 26038302 ~ 26041843 (+)
G1720853 NA other upstream 405319 25636335 ~ 25636589 (+)
G1720836 NA other upstream 429640 25611816 ~ 25612268 (+)
LOC110500097 LOC106576231 other upstream 1724370 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 1747111 24277797 ~ 24294858 (+)
cep83 LOC106609290 other downstream 286671 26324744 ~ 26333964 (+)
G1722079 NA other downstream 778544 26821647 ~ 26821935 (+)
LOC110501048 LOC106609163 other downstream 2279417 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 other downstream 2298398 28341423 ~ 28343734 (+)
G1724234 LOC106609199 other downstream 3169716 29209169 ~ 29214283 (+)

Expression


Co-expression Network