Gene
RNA
| Item | Value |
|---|---|
| gene id | G1721128 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 26107859 ~ 26126990 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1971827 | True | 292 | lncRNA | 0.38 | 2 | 26107859 | 26126990 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500131 | prkcq | coding | upstream | 95531 | 25988102 ~ 26012328 (+) |
| sfmbt2 | LOC106576194 | coding | upstream | 130580 | 25931590 ~ 25977279 (+) |
| LOC110500124 | itih5 | coding | upstream | 200373 | 25891873 ~ 25907486 (+) |
| LOC110500127 | LOC106576199 | coding | upstream | 232018 | 25871821 ~ 25875841 (+) |
| LOC110500123 | NA | coding | upstream | 334978 | 25768886 ~ 25772881 (+) |
| cdc123 | LOC106576189 | coding | downstream | 11101 | 26138091 ~ 26147264 (+) |
| camk1da | LOC106576188 | coding | downstream | 21765 | 26148755 ~ 26217898 (+) |
| LOC110500144 | optn | coding | downstream | 101986 | 26228976 ~ 26237213 (+) |
| mcm10 | mcm10 | coding | downstream | 111019 | 26238009 ~ 26247743 (+) |
| LOC110500147 | LOC106609285 | coding | downstream | 139152 | 26266142 ~ 26301475 (+) |
| G1721126 | NA | non-coding | upstream | 822 | 26106779 ~ 26107037 (+) |
| G1721125 | NA | non-coding | upstream | 1689 | 26105941 ~ 26106170 (+) |
| il15ra | LOC100136332 | non-coding | upstream | 11954 | 26063816 ~ 26121228 (+) |
| G1721087 | pfkfb3 | non-coding | upstream | 64756 | 26041908 ~ 26043103 (+) |
| G1721050 | NA | non-coding | upstream | 132195 | 25974562 ~ 25975664 (+) |
| G1721131 | fbxo18 | non-coding | downstream | 3789 | 26130779 ~ 26132124 (+) |
| G1721188 | NA | non-coding | downstream | 121226 | 26248216 ~ 26248462 (+) |
| G1721189 | NA | non-coding | downstream | 121514 | 26248504 ~ 26249045 (+) |
| G1721191 | NA | non-coding | downstream | 124197 | 26251187 ~ 26251509 (+) |
| G1721192 | NA | non-coding | downstream | 127084 | 26254074 ~ 26254706 (+) |
| G1721084 | pfkfb3 | other | upstream | 66016 | 26038302 ~ 26041843 (+) |
| G1720853 | NA | other | upstream | 471270 | 25636335 ~ 25636589 (+) |
| G1720836 | NA | other | upstream | 495591 | 25611816 ~ 25612268 (+) |
| LOC110500097 | LOC106576231 | other | upstream | 1790321 | 24315919 ~ 24321712 (+) |
| adm2a | LOC106609361 | other | upstream | 1813062 | 24277797 ~ 24294858 (+) |
| cep83 | LOC106609290 | other | downstream | 202784 | 26324744 ~ 26333964 (+) |
| G1722079 | NA | other | downstream | 694657 | 26821647 ~ 26821935 (+) |
| LOC110501048 | LOC106609163 | other | downstream | 2195530 | 28311018 ~ 28335924 (+) |
| LOC110500183 | LOC106609180 | other | downstream | 2214511 | 28341423 ~ 28343734 (+) |
| G1724234 | LOC106609199 | other | downstream | 3085829 | 29209169 ~ 29214283 (+) |
