Gene
RNA
| Item | Value |
|---|---|
| gene id | G1721189 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 26248504 ~ 26249045 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: unique cartilage matrix-associated protein isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1971899 | True | 542 | lncRNA | 0.43 | 1 | 26248504 | 26249045 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mcm10 | mcm10 | coding | upstream | 761 | 26238009 ~ 26247743 (+) |
| LOC110500144 | optn | coding | upstream | 11291 | 26228976 ~ 26237213 (+) |
| camk1da | LOC106576188 | coding | upstream | 30606 | 26148755 ~ 26217898 (+) |
| cdc123 | LOC106576189 | coding | upstream | 101240 | 26138091 ~ 26147264 (+) |
| il15ra | LOC100136332 | coding | upstream | 127276 | 26063816 ~ 26121228 (+) |
| LOC110500147 | LOC106609285 | coding | downstream | 17097 | 26266142 ~ 26301475 (+) |
| LOC110500149 | LOC106609287 | coding | downstream | 67489 | 26316534 ~ 26324591 (+) |
| cep83 | LOC106609290 | coding | downstream | 75699 | 26324744 ~ 26333964 (+) |
| ncaph2 | LOC106609295 | coding | downstream | 179611 | 26428656 ~ 26439619 (+) |
| LOC110500156 | LOC106609297 | coding | downstream | 200212 | 26449257 ~ 26511168 (+) |
| G1721188 | NA | non-coding | upstream | 42 | 26248216 ~ 26248462 (+) |
| G1721131 | fbxo18 | non-coding | upstream | 116380 | 26130779 ~ 26132124 (+) |
| G1721128 | NA | non-coding | upstream | 121514 | 26107859 ~ 26126990 (+) |
| G1721126 | NA | non-coding | upstream | 141467 | 26106779 ~ 26107037 (+) |
| G1721125 | NA | non-coding | upstream | 142334 | 26105941 ~ 26106170 (+) |
| G1721191 | NA | non-coding | downstream | 2142 | 26251187 ~ 26251509 (+) |
| G1721192 | NA | non-coding | downstream | 5029 | 26254074 ~ 26254706 (+) |
| G1721193 | NA | non-coding | downstream | 6623 | 26255668 ~ 26256496 (+) |
| G1721194 | NA | non-coding | downstream | 8466 | 26257511 ~ 26257741 (+) |
| G1721200 | NA | non-coding | downstream | 11265 | 26260310 ~ 26260617 (+) |
| G1721084 | pfkfb3 | other | upstream | 206661 | 26038302 ~ 26041843 (+) |
| G1720853 | NA | other | upstream | 611915 | 25636335 ~ 25636589 (+) |
| G1720836 | NA | other | upstream | 636236 | 25611816 ~ 25612268 (+) |
| LOC110500097 | LOC106576231 | other | upstream | 1930966 | 24315919 ~ 24321712 (+) |
| adm2a | LOC106609361 | other | upstream | 1953707 | 24277797 ~ 24294858 (+) |
| G1722079 | NA | other | downstream | 572602 | 26821647 ~ 26821935 (+) |
| LOC110501048 | LOC106609163 | other | downstream | 2073475 | 28311018 ~ 28335924 (+) |
| LOC110500183 | LOC106609180 | other | downstream | 2092456 | 28341423 ~ 28343734 (+) |
| G1724234 | LOC106609199 | other | downstream | 2963774 | 29209169 ~ 29214283 (+) |
