G1721207



Basic Information


Item Value
gene id G1721207
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 26265610 ~ 26265857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1971918
atattaagcaaaccagattgcAACATCTTCTTGTATTTTTAATGTATGGATAGCCAAGGgtacaccaacactcagacaaaATTTACagatgaagcatgtgtgtttagtctgccagatcagaggcaataaggatgaccagggatgttttcttaaTTAGTGTGTGAAAACAGACAATTTgactgtcctgctaagcattcaaaatgtaatgagtacttttgggtgtcagggaaaatgcatggagtaaaaag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1971918 True 248 lncRNA 0.37 1 26265610 26265857

Neighbor


gene id symbol gene type direction distance location
mcm10 mcm10 coding upstream 17867 26238009 ~ 26247743 (+)
LOC110500144 optn coding upstream 28397 26228976 ~ 26237213 (+)
camk1da LOC106576188 coding upstream 47712 26148755 ~ 26217898 (+)
cdc123 LOC106576189 coding upstream 118346 26138091 ~ 26147264 (+)
il15ra LOC100136332 coding upstream 144382 26063816 ~ 26121228 (+)
LOC110500147 LOC106609285 coding downstream 285 26266142 ~ 26301475 (+)
LOC110500149 LOC106609287 coding downstream 50677 26316534 ~ 26324591 (+)
cep83 LOC106609290 coding downstream 58887 26324744 ~ 26333964 (+)
ncaph2 LOC106609295 coding downstream 162799 26428656 ~ 26439619 (+)
LOC110500156 LOC106609297 coding downstream 183400 26449257 ~ 26511168 (+)
G1721205 NA non-coding upstream 1341 26263972 ~ 26264269 (+)
G1721204 NA non-coding upstream 1939 26263324 ~ 26263671 (+)
G1721203 NA non-coding upstream 2575 26262676 ~ 26263035 (+)
G1721201 NA non-coding upstream 4251 26261131 ~ 26261359 (+)
G1721200 NA non-coding upstream 4993 26260310 ~ 26260617 (+)
G1721246 NA non-coding downstream 105975 26371832 ~ 26379091 (+)
G1721294 NA non-coding downstream 186583 26452440 ~ 26453819 (+)
G1721289 NA non-coding downstream 232933 26498790 ~ 26514372 (+)
G1721338 NA non-coding downstream 266095 26531952 ~ 26532250 (+)
G1721350 NA non-coding downstream 277562 26543419 ~ 26543829 (+)
G1721084 pfkfb3 other upstream 223767 26038302 ~ 26041843 (+)
G1720853 NA other upstream 629021 25636335 ~ 25636589 (+)
G1720836 NA other upstream 653342 25611816 ~ 25612268 (+)
LOC110500097 LOC106576231 other upstream 1948072 24315919 ~ 24321712 (+)
adm2a LOC106609361 other upstream 1970813 24277797 ~ 24294858 (+)
G1722079 NA other downstream 555790 26821647 ~ 26821935 (+)
LOC110501048 LOC106609163 other downstream 2056663 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 other downstream 2075644 28341423 ~ 28343734 (+)
G1724234 LOC106609199 other downstream 2946962 29209169 ~ 29214283 (+)

Expression



Co-expression Network