G1721246



Basic Information


Item Value
gene id G1721246
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 26371832 ~ 26379091 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1971959
CTGAGTTGTGTTGGTCAATTTCTTCAACAGATGATCAGGTCTATATAATTATCAAACATACATTAGTAATGGAAAGGAAACACACTCATTGTTTAAGTATGATAATTCTCCATTAGTAATACAATTGTAGGCAGAAgttggtacagagtacagtatatgataGCTCTCCCCAGGTTCTGCAAAATGTCTAAGACATCCTGTAACTCATATAGCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1971959 True 214 lncRNA 0.35 2 26371832 26379091

Neighbor


gene id symbol gene type direction distance location
cep83 LOC106609290 coding upstream 37868 26324744 ~ 26333964 (+)
LOC110500149 LOC106609287 coding upstream 47241 26316534 ~ 26324591 (+)
LOC110500147 LOC106609285 coding upstream 70357 26266142 ~ 26301475 (+)
mcm10 mcm10 coding upstream 124089 26238009 ~ 26247743 (+)
LOC110500144 optn coding upstream 134619 26228976 ~ 26237213 (+)
ncaph2 LOC106609295 coding downstream 49565 26428656 ~ 26439619 (+)
LOC110500156 LOC106609297 coding downstream 70166 26449257 ~ 26511168 (+)
LOC110500158 LOC106609299 coding downstream 141320 26520411 ~ 26618210 (+)
kcnd2 LOC106609300 coding downstream 483205 26862296 ~ 27012894 (+)
LOC110500161 LOC106609303 coding downstream 668872 27047963 ~ 27060560 (+)
G1721207 NA non-coding upstream 105975 26265610 ~ 26265857 (+)
G1721205 NA non-coding upstream 107563 26263972 ~ 26264269 (+)
G1721204 NA non-coding upstream 108161 26263324 ~ 26263671 (+)
G1721203 NA non-coding upstream 108797 26262676 ~ 26263035 (+)
G1721201 NA non-coding upstream 110473 26261131 ~ 26261359 (+)
G1721294 NA non-coding downstream 73349 26452440 ~ 26453819 (+)
G1721289 NA non-coding downstream 119699 26498790 ~ 26514372 (+)
G1721338 NA non-coding downstream 152861 26531952 ~ 26532250 (+)
G1721350 NA non-coding downstream 164328 26543419 ~ 26543829 (+)
G1721900 NA non-coding downstream 317020 26696111 ~ 26749099 (+)
G1721084 pfkfb3 other upstream 329989 26038302 ~ 26041843 (+)
G1720853 NA other upstream 735243 25636335 ~ 25636589 (+)
G1720836 NA other upstream 759564 25611816 ~ 25612268 (+)
LOC110500097 LOC106576231 other upstream 2054294 24315919 ~ 24321712 (+)
G1722079 NA other downstream 442556 26821647 ~ 26821935 (+)
LOC110501048 LOC106609163 other downstream 1943429 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 other downstream 1962410 28341423 ~ 28343734 (+)
G1724234 LOC106609199 other downstream 2833728 29209169 ~ 29214283 (+)
G1724262 LOC106609200 other downstream 2879169 29256778 ~ 29259929 (+)

Expression



Co-expression Network