Gene
RNA
| Item | Value |
|---|---|
| gene id | G1721294 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 26452440 ~ 26453819 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1972023 | True | 236 | lncRNA | 0.42 | 2 | 26452440 | 26453819 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ncaph2 | LOC106609295 | coding | upstream | 12821 | 26428656 ~ 26439619 (+) |
| cep83 | LOC106609290 | coding | upstream | 118476 | 26324744 ~ 26333964 (+) |
| LOC110500149 | LOC106609287 | coding | upstream | 127849 | 26316534 ~ 26324591 (+) |
| LOC110500147 | LOC106609285 | coding | upstream | 150965 | 26266142 ~ 26301475 (+) |
| mcm10 | mcm10 | coding | upstream | 204697 | 26238009 ~ 26247743 (+) |
| LOC110500158 | LOC106609299 | coding | downstream | 66592 | 26520411 ~ 26618210 (+) |
| kcnd2 | LOC106609300 | coding | downstream | 408477 | 26862296 ~ 27012894 (+) |
| LOC110500161 | LOC106609303 | coding | downstream | 594144 | 27047963 ~ 27060560 (+) |
| cped1 | LOC106609304 | coding | downstream | 613119 | 27066938 ~ 27150379 (+) |
| LOC110500163 | LOC106609305 | coding | downstream | 698782 | 27152601 ~ 27161037 (+) |
| G1721246 | NA | non-coding | upstream | 73349 | 26371832 ~ 26379091 (+) |
| G1721207 | NA | non-coding | upstream | 186583 | 26265610 ~ 26265857 (+) |
| G1721205 | NA | non-coding | upstream | 188171 | 26263972 ~ 26264269 (+) |
| G1721204 | NA | non-coding | upstream | 188769 | 26263324 ~ 26263671 (+) |
| G1721203 | NA | non-coding | upstream | 189405 | 26262676 ~ 26263035 (+) |
| G1721289 | NA | non-coding | downstream | 44971 | 26498790 ~ 26514372 (+) |
| G1721338 | NA | non-coding | downstream | 78133 | 26531952 ~ 26532250 (+) |
| G1721350 | NA | non-coding | downstream | 89600 | 26543419 ~ 26543829 (+) |
| G1721900 | NA | non-coding | downstream | 242292 | 26696111 ~ 26749099 (+) |
| G1722002 | NA | non-coding | downstream | 317807 | 26771626 ~ 26771944 (+) |
| G1721084 | pfkfb3 | other | upstream | 410597 | 26038302 ~ 26041843 (+) |
| G1720853 | NA | other | upstream | 815851 | 25636335 ~ 25636589 (+) |
| G1720836 | NA | other | upstream | 840172 | 25611816 ~ 25612268 (+) |
| LOC110500097 | LOC106576231 | other | upstream | 2134902 | 24315919 ~ 24321712 (+) |
| G1722079 | NA | other | downstream | 367828 | 26821647 ~ 26821935 (+) |
| LOC110501048 | LOC106609163 | other | downstream | 1868701 | 28311018 ~ 28335924 (+) |
| LOC110500183 | LOC106609180 | other | downstream | 1887682 | 28341423 ~ 28343734 (+) |
| G1724234 | LOC106609199 | other | downstream | 2759000 | 29209169 ~ 29214283 (+) |
| G1724262 | LOC106609200 | other | downstream | 2804441 | 29256778 ~ 29259929 (+) |
