G1721338


Basic Information

Item Value
gene id G1721338
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 26531952 ~ 26532250 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1972072
GTAAAAGTTTTAGCACAGCACCACAGCCAGGGTCAAACGAGGACCATAGAGCAGtttccactggagagagagagggagagattaggAGCAGAGTGAAAGATAAAGTAGAGAGGAGACATAGAGATATGGACAGGAAGAGAAGAGTGGAAACAGGGGATAGGGTGACTGGAAgagtgaggagatggacagGTAGAGAAGAGTGGAAACAGGGGATAGGGTGAGTGGAAGAGTGAagagatggac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1972072 True 243 lncRNA 0.49 2 26531952 26532250

Neighbor

gene id symbol gene type direction distance location
LOC110500156 LOC106609297 coding upstream 20784 26449257 ~ 26511168 (+)
ncaph2 LOC106609295 coding upstream 92333 26428656 ~ 26439619 (+)
cep83 LOC106609290 coding upstream 197988 26324744 ~ 26333964 (+)
LOC110500149 LOC106609287 coding upstream 207361 26316534 ~ 26324591 (+)
LOC110500147 LOC106609285 coding upstream 230477 26266142 ~ 26301475 (+)
kcnd2 LOC106609300 coding downstream 330046 26862296 ~ 27012894 (+)
LOC110500161 LOC106609303 coding downstream 515713 27047963 ~ 27060560 (+)
cped1 LOC106609304 coding downstream 534688 27066938 ~ 27150379 (+)
LOC110500163 LOC106609305 coding downstream 620351 27152601 ~ 27161037 (+)
stab2 stab2 coding downstream 638453 27170703 ~ 27210849 (+)
G1721289 NA non-coding upstream 17580 26498790 ~ 26514372 (+)
G1721294 NA non-coding upstream 78133 26452440 ~ 26453819 (+)
G1721246 NA non-coding upstream 152861 26371832 ~ 26379091 (+)
G1721207 NA non-coding upstream 266095 26265610 ~ 26265857 (+)
G1721205 NA non-coding upstream 267683 26263972 ~ 26264269 (+)
G1721350 NA non-coding downstream 11169 26543419 ~ 26543829 (+)
G1721900 NA non-coding downstream 163861 26696111 ~ 26749099 (+)
G1722002 NA non-coding downstream 239376 26771626 ~ 26771944 (+)
G1722030 NA non-coding downstream 253933 26786183 ~ 26786536 (+)
G1722060 NA non-coding downstream 276175 26808425 ~ 26808683 (+)
G1721084 pfkfb3 other upstream 490109 26038302 ~ 26041843 (+)
G1720853 NA other upstream 895363 25636335 ~ 25636589 (+)
G1720836 NA other upstream 919684 25611816 ~ 25612268 (+)
LOC110500097 LOC106576231 other upstream 2214414 24315919 ~ 24321712 (+)
G1722079 NA other downstream 289397 26821647 ~ 26821935 (+)
LOC110501048 LOC106609163 other downstream 1790270 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 other downstream 1809251 28341423 ~ 28343734 (+)
G1724234 LOC106609199 other downstream 2680569 29209169 ~ 29214283 (+)
G1724262 LOC106609200 other downstream 2726010 29256778 ~ 29259929 (+)

Expression


Co-expression Network