G1722308


Basic Information

Item Value
gene id G1722308
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 27233131 ~ 27233392 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1973148
gagcaaatgatgagaactacattgatttggggttcacttatactgggagtagtgcctttcctcagccacagtgtgttatatgtgcaaaactactatctcacaactcgatgaaaccttcactcttgcgcagacatttagaaacaaaacatgccaacttcaaataagccacaggagtctGAGCGAGAATGAagacttttgagtagtaagacatgtataaaagcaacagataccattaataagaaagGGGCTAGAAGTGTTTcct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1973148 True 262 lncRNA 0.40 1 27233131 27233392

Neighbor

gene id symbol gene type direction distance location
stab2 stab2 coding upstream 22282 27170703 ~ 27210849 (+)
LOC110500163 LOC106609305 coding upstream 72094 27152601 ~ 27161037 (+)
cped1 LOC106609304 coding upstream 82752 27066938 ~ 27150379 (+)
LOC110500161 LOC106609303 coding upstream 172571 27047963 ~ 27060560 (+)
kcnd2 LOC106609300 coding upstream 220237 26862296 ~ 27012894 (+)
LOC110500167 NA coding downstream 75807 27309199 ~ 27311609 (+)
LOC110500177 LOC106576158 coding downstream 422984 27656376 ~ 27685960 (+)
LOC110500180 LOC106609324 coding downstream 657073 27890465 ~ 27902897 (+)
LOC110500181 LOC106609325 coding downstream 671689 27905081 ~ 27923178 (+)
LOC110500182 LOC106609326 coding downstream 704427 27937819 ~ 27954437 (+)
G1722273 NA non-coding upstream 41130 27131079 ~ 27192001 (+)
G1722095 NA non-coding upstream 389060 26831939 ~ 26844071 (+)
G1722077 NA non-coding upstream 413532 26819365 ~ 26819599 (+)
G1722076 NA non-coding upstream 414091 26818809 ~ 26819040 (+)
G1722313 NA non-coding downstream 5092 27238484 ~ 27239624 (+)
G1722323 NA non-coding downstream 17762 27251154 ~ 27252736 (+)
G1722328 NA non-coding downstream 33190 27266582 ~ 27267891 (+)
G1722346 NA non-coding downstream 58945 27292337 ~ 27292931 (+)
G1722405 NA non-coding downstream 148804 27382196 ~ 27382529 (+)
G1722079 NA other upstream 411196 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 902038 26324744 ~ 26333964 (+)
G1721084 pfkfb3 other upstream 1191288 26038302 ~ 26041843 (+)
G1720853 NA other upstream 1596542 25636335 ~ 25636589 (+)
G1720836 NA other upstream 1620863 25611816 ~ 25612268 (+)
LOC110501048 LOC106609163 other downstream 1089128 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 other downstream 1108109 28341423 ~ 28343734 (+)
G1724234 LOC106609199 other downstream 1979427 29209169 ~ 29214283 (+)
G1724262 LOC106609200 other downstream 2024868 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 2656894 29890286 ~ 29891957 (+)

Expression


Co-expression Network