Gene
RNA
| Item | Value |
|---|---|
| gene id | G1722328 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 27266582 ~ 27267891 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106606497 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1973175 | True | 926 | lncRNA | 0.44 | 3 | 27266582 | 27267891 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| stab2 | stab2 | coding | upstream | 55733 | 27170703 ~ 27210849 (+) |
| LOC110500163 | LOC106609305 | coding | upstream | 105545 | 27152601 ~ 27161037 (+) |
| cped1 | LOC106609304 | coding | upstream | 116203 | 27066938 ~ 27150379 (+) |
| LOC110500161 | LOC106609303 | coding | upstream | 206022 | 27047963 ~ 27060560 (+) |
| kcnd2 | LOC106609300 | coding | upstream | 253688 | 26862296 ~ 27012894 (+) |
| LOC110500167 | NA | coding | downstream | 41308 | 27309199 ~ 27311609 (+) |
| LOC110500177 | LOC106576158 | coding | downstream | 388485 | 27656376 ~ 27685960 (+) |
| LOC110500180 | LOC106609324 | coding | downstream | 622574 | 27890465 ~ 27902897 (+) |
| LOC110500181 | LOC106609325 | coding | downstream | 637190 | 27905081 ~ 27923178 (+) |
| LOC110500182 | LOC106609326 | coding | downstream | 669928 | 27937819 ~ 27954437 (+) |
| G1722323 | NA | non-coding | upstream | 13846 | 27251154 ~ 27252736 (+) |
| G1722313 | NA | non-coding | upstream | 26958 | 27238484 ~ 27239624 (+) |
| G1722308 | NA | non-coding | upstream | 33190 | 27233131 ~ 27233392 (+) |
| G1722273 | NA | non-coding | upstream | 74581 | 27131079 ~ 27192001 (+) |
| G1722346 | NA | non-coding | downstream | 24446 | 27292337 ~ 27292931 (+) |
| G1722405 | NA | non-coding | downstream | 114305 | 27382196 ~ 27382529 (+) |
| G1722415 | LOC106609312 | non-coding | downstream | 124476 | 27392367 ~ 27392788 (+) |
| G1722524 | NA | non-coding | downstream | 297988 | 27565879 ~ 27570770 (+) |
| G1722555 | NA | non-coding | downstream | 335488 | 27603379 ~ 27624817 (+) |
| G1722079 | NA | other | upstream | 444647 | 26821647 ~ 26821935 (+) |
| cep83 | LOC106609290 | other | upstream | 935489 | 26324744 ~ 26333964 (+) |
| G1721084 | pfkfb3 | other | upstream | 1224739 | 26038302 ~ 26041843 (+) |
| G1720853 | NA | other | upstream | 1629993 | 25636335 ~ 25636589 (+) |
| G1720836 | NA | other | upstream | 1654314 | 25611816 ~ 25612268 (+) |
| LOC110501048 | LOC106609163 | other | downstream | 1054629 | 28311018 ~ 28335924 (+) |
| LOC110500183 | LOC106609180 | other | downstream | 1073610 | 28341423 ~ 28343734 (+) |
| G1724234 | LOC106609199 | other | downstream | 1944928 | 29209169 ~ 29214283 (+) |
| G1724262 | LOC106609200 | other | downstream | 1990369 | 29256778 ~ 29259929 (+) |
| G1725312 | LOC106576088 | other | downstream | 2622395 | 29890286 ~ 29891957 (+) |
