Gene
RNA
| Item | Value |
|---|---|
| gene id | G1722579 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 27644345 ~ 27647281 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1973437 | True | 361 | lncRNA | 0.47 | 2 | 27644345 | 27647281 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500167 | NA | coding | upstream | 332736 | 27309199 ~ 27311609 (+) |
| stab2 | stab2 | coding | upstream | 433496 | 27170703 ~ 27210849 (+) |
| LOC110500163 | LOC106609305 | coding | upstream | 483308 | 27152601 ~ 27161037 (+) |
| cped1 | LOC106609304 | coding | upstream | 493966 | 27066938 ~ 27150379 (+) |
| LOC110500161 | LOC106609303 | coding | upstream | 583785 | 27047963 ~ 27060560 (+) |
| LOC110500177 | LOC106576158 | coding | downstream | 9095 | 27656376 ~ 27685960 (+) |
| LOC110500180 | LOC106609324 | coding | downstream | 243184 | 27890465 ~ 27902897 (+) |
| LOC110500181 | LOC106609325 | coding | downstream | 257800 | 27905081 ~ 27923178 (+) |
| LOC110500182 | LOC106609326 | coding | downstream | 290538 | 27937819 ~ 27954437 (+) |
| LOC118942914 | NA | coding | downstream | 607344 | 28254592 ~ 28257603 (+) |
| G1722565 | NA | non-coding | upstream | 18125 | 27625020 ~ 27626220 (+) |
| G1722555 | NA | non-coding | upstream | 19528 | 27603379 ~ 27624817 (+) |
| G1722524 | NA | non-coding | upstream | 73575 | 27565879 ~ 27570770 (+) |
| G1722415 | LOC106609312 | non-coding | upstream | 251557 | 27392367 ~ 27392788 (+) |
| G1722405 | NA | non-coding | upstream | 261816 | 27382196 ~ 27382529 (+) |
| G1722581 | NA | non-coding | downstream | 121 | 27647402 ~ 27648488 (+) |
| G1722612 | NA | non-coding | downstream | 43449 | 27690730 ~ 27690957 (+) |
| G1722619 | NA | non-coding | downstream | 56478 | 27703759 ~ 27704087 (+) |
| G1722622 | NA | non-coding | downstream | 59305 | 27706586 ~ 27706808 (+) |
| G1722626 | NA | non-coding | downstream | 65112 | 27712393 ~ 27712634 (+) |
| G1722079 | NA | other | upstream | 822410 | 26821647 ~ 26821935 (+) |
| cep83 | LOC106609290 | other | upstream | 1313252 | 26324744 ~ 26333964 (+) |
| G1721084 | pfkfb3 | other | upstream | 1602502 | 26038302 ~ 26041843 (+) |
| G1720853 | NA | other | upstream | 2007756 | 25636335 ~ 25636589 (+) |
| G1720836 | NA | other | upstream | 2032077 | 25611816 ~ 25612268 (+) |
| LOC110501048 | LOC106609163 | other | downstream | 675239 | 28311018 ~ 28335924 (+) |
| LOC110500183 | LOC106609180 | other | downstream | 694220 | 28341423 ~ 28343734 (+) |
| G1724234 | LOC106609199 | other | downstream | 1565538 | 29209169 ~ 29214283 (+) |
| G1724262 | LOC106609200 | other | downstream | 1610979 | 29256778 ~ 29259929 (+) |
| G1725312 | LOC106576088 | other | downstream | 2243005 | 29890286 ~ 29891957 (+) |
