G1722612


Basic Information

Item Value
gene id G1722612
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 27690730 ~ 27690957 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1973474
GTTCTATATTAAAGGGAGGTGACAAACATGACCAAATGACATGTCTATGTGGGCGGTGAAGTGATTCATCTGTGAAGTTGAGATCTAGATGTTTTTGTGGGGCAGTCATGTCAATATAATAATGCATCCAGAAGAATGTTCAGCATGTAGGAGccatactacactgaacaaaaatataaacgcaacatgtgaagtgttggtcccatgtttcatgagatgaaataataG

Function

NR:

description
CREB-binding protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1973474 True 228 lncRNA 0.38 1 27690730 27690957

Neighbor

gene id symbol gene type direction distance location
LOC110500177 LOC106576158 coding upstream 4770 27656376 ~ 27685960 (+)
LOC110500167 NA coding upstream 379121 27309199 ~ 27311609 (+)
stab2 stab2 coding upstream 479881 27170703 ~ 27210849 (+)
LOC110500163 LOC106609305 coding upstream 529693 27152601 ~ 27161037 (+)
cped1 LOC106609304 coding upstream 540351 27066938 ~ 27150379 (+)
LOC110500180 LOC106609324 coding downstream 199508 27890465 ~ 27902897 (+)
LOC110500181 LOC106609325 coding downstream 214124 27905081 ~ 27923178 (+)
LOC110500182 LOC106609326 coding downstream 246862 27937819 ~ 27954437 (+)
LOC118942914 NA coding downstream 563668 28254592 ~ 28257603 (+)
LOC110501048 LOC106609163 coding downstream 620061 28311018 ~ 28335924 (+)
G1722581 NA non-coding upstream 42242 27647402 ~ 27648488 (+)
G1722579 NA non-coding upstream 43449 27644345 ~ 27647281 (+)
G1722565 NA non-coding upstream 64510 27625020 ~ 27626220 (+)
G1722555 NA non-coding upstream 65913 27603379 ~ 27624817 (+)
G1722524 NA non-coding upstream 119960 27565879 ~ 27570770 (+)
G1722619 NA non-coding downstream 12802 27703759 ~ 27704087 (+)
G1722622 NA non-coding downstream 15629 27706586 ~ 27706808 (+)
G1722626 NA non-coding downstream 21436 27712393 ~ 27712634 (+)
G1722607 NA non-coding downstream 24472 27715429 ~ 27719033 (+)
G1722630 NA non-coding downstream 38848 27729805 ~ 27730059 (+)
G1722079 NA other upstream 868795 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 1359637 26324744 ~ 26333964 (+)
G1721084 pfkfb3 other upstream 1648887 26038302 ~ 26041843 (+)
G1720853 NA other upstream 2054141 25636335 ~ 25636589 (+)
G1720836 NA other upstream 2078462 25611816 ~ 25612268 (+)
LOC110500183 LOC106609180 other downstream 650544 28341423 ~ 28343734 (+)
G1724234 LOC106609199 other downstream 1521862 29209169 ~ 29214283 (+)
G1724262 LOC106609200 other downstream 1567303 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 2199329 29890286 ~ 29891957 (+)

Expression


Co-expression Network