G1722626


Basic Information

Item Value
gene id G1722626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 27712393 ~ 27712634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1973488
CCCCACTACACCGGTACTGTACACCCCTgtttaactacctctccctacTACACCGGTATTGTACACCCCTGTTTAACTACCTCTCCCCACTACACCGGTACTGTACACCCCTGTTTAACTACCTCTCCCCACTACACCGGTACTGTACACCCCTgtttaactacctctccctacTACACCGGTACTGTACACCCCTgtttaactacctctccctacTACACCGGTACTGTACACCCCTGTTT

Function

NR:

description
homeobox protein DTH-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1973488 True 242 lncRNA 0.51 1 27712393 27712634

Neighbor

gene id symbol gene type direction distance location
LOC110500177 LOC106576158 coding upstream 26433 27656376 ~ 27685960 (+)
LOC110500167 NA coding upstream 400784 27309199 ~ 27311609 (+)
stab2 stab2 coding upstream 501544 27170703 ~ 27210849 (+)
LOC110500163 LOC106609305 coding upstream 551356 27152601 ~ 27161037 (+)
cped1 LOC106609304 coding upstream 562014 27066938 ~ 27150379 (+)
LOC110500180 LOC106609324 coding downstream 177831 27890465 ~ 27902897 (+)
LOC110500181 LOC106609325 coding downstream 192447 27905081 ~ 27923178 (+)
LOC110500182 LOC106609326 coding downstream 225185 27937819 ~ 27954437 (+)
LOC118942914 NA coding downstream 541991 28254592 ~ 28257603 (+)
LOC110501048 LOC106609163 coding downstream 598384 28311018 ~ 28335924 (+)
G1722622 NA non-coding upstream 5585 27706586 ~ 27706808 (+)
G1722619 NA non-coding upstream 8306 27703759 ~ 27704087 (+)
G1722612 NA non-coding upstream 21436 27690730 ~ 27690957 (+)
G1722581 NA non-coding upstream 63905 27647402 ~ 27648488 (+)
G1722579 NA non-coding upstream 65112 27644345 ~ 27647281 (+)
G1722607 NA non-coding downstream 2795 27715429 ~ 27719033 (+)
G1722630 NA non-coding downstream 17171 27729805 ~ 27730059 (+)
G1722654 LOC106609323 non-coding downstream 50396 27763030 ~ 27767440 (+)
G1722671 NA non-coding downstream 107812 27820446 ~ 27821563 (+)
G1722756 NA non-coding downstream 289633 28002267 ~ 28023525 (+)
G1722079 NA other upstream 890458 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 1381300 26324744 ~ 26333964 (+)
G1721084 pfkfb3 other upstream 1670550 26038302 ~ 26041843 (+)
G1720853 NA other upstream 2075804 25636335 ~ 25636589 (+)
G1720836 NA other upstream 2100125 25611816 ~ 25612268 (+)
LOC110500183 LOC106609180 other downstream 628867 28341423 ~ 28343734 (+)
G1724234 LOC106609199 other downstream 1500185 29209169 ~ 29214283 (+)
G1724262 LOC106609200 other downstream 1545626 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 2177652 29890286 ~ 29891957 (+)

Expression


Co-expression Network