G1722842


Basic Information

Item Value
gene id G1722842
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 28200506 ~ 28200736 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1973722
GGTCTCAATGTAGgaagcagcctctctgagttagtgatggctatttaacagtctgatgaccttgagatagaagctgtttttcagtctctcggtcccagctttgatgcacctgtactgacctcgccttctggatgatagcggtgtgaacaggcagtggctcgggtggatgttgcccttgatgatctttaCGGTCTTCCTGTGACAACGGGCGACGTAGGTGTCATagggggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1973722 True 231 lncRNA 0.52 1 28200506 28200736

Neighbor

gene id symbol gene type direction distance location
LOC110500182 LOC106609326 coding upstream 246069 27937819 ~ 27954437 (+)
LOC110500181 LOC106609325 coding upstream 277328 27905081 ~ 27923178 (+)
LOC110500180 LOC106609324 coding upstream 297609 27890465 ~ 27902897 (+)
LOC110500177 LOC106576158 coding upstream 514546 27656376 ~ 27685960 (+)
LOC110500167 NA coding upstream 888897 27309199 ~ 27311609 (+)
LOC118942914 NA coding downstream 53889 28254592 ~ 28257603 (+)
LOC110501048 LOC106609163 coding downstream 110282 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 coding downstream 140687 28341423 ~ 28343734 (+)
utp20 utp20 coding downstream 151215 28351951 ~ 28376045 (+)
LOC110500185 LOC106609173 coding downstream 179086 28379822 ~ 28390596 (+)
G1722834 NA non-coding upstream 12882 28187260 ~ 28187624 (+)
G1722799 NA non-coding upstream 81126 28119015 ~ 28119380 (+)
G1722784 NA non-coding upstream 117942 28082270 ~ 28082564 (+)
G1722756 NA non-coding upstream 176981 28002267 ~ 28023525 (+)
G1722671 NA non-coding upstream 378943 27820446 ~ 27821563 (+)
G1722851 NA non-coding downstream 24724 28225460 ~ 28225680 (+)
G1722858 NA non-coding downstream 35648 28236384 ~ 28236599 (+)
G1722863 NA non-coding downstream 42554 28243290 ~ 28243497 (+)
G1723558 NA non-coding downstream 65857 28266593 ~ 28266992 (+)
G1722079 NA other upstream 1378571 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 1869413 26324744 ~ 26333964 (+)
G1721084 pfkfb3 other upstream 2158663 26038302 ~ 26041843 (+)
G1720853 NA other upstream 2563917 25636335 ~ 25636589 (+)
G1720836 NA other upstream 2588238 25611816 ~ 25612268 (+)
G1724234 LOC106609199 other downstream 1012083 29209169 ~ 29214283 (+)
G1724262 LOC106609200 other downstream 1057524 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 1689550 29890286 ~ 29891957 (+)

Expression


Co-expression Network