G1722858


Basic Information

Item Value
gene id G1722858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 28236384 ~ 28236599 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1973738
AGGTTGTGCGCTTGTCCGTCCATTCTGAGTGGTGCACATAAACGGTTATTCCACGAGAGCCTATCTTTAAATTTAAAATGATTGTTAATTAGCGCGTGGAAAGCTTGTGAAACCGGTTCACTATAGAAAAAGGGTGTCCAATAATGATTGTTCATGTATAtctcattttttttgtaaatgtcacatatatggttcttcgtctgtaggatTCAATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1973738 True 216 lncRNA 0.37 1 28236384 28236599

Neighbor

gene id symbol gene type direction distance location
LOC110500182 LOC106609326 coding upstream 281947 27937819 ~ 27954437 (+)
LOC110500181 LOC106609325 coding upstream 313206 27905081 ~ 27923178 (+)
LOC110500180 LOC106609324 coding upstream 333487 27890465 ~ 27902897 (+)
LOC110500177 LOC106576158 coding upstream 550424 27656376 ~ 27685960 (+)
LOC110500167 NA coding upstream 924775 27309199 ~ 27311609 (+)
LOC118942914 NA coding downstream 18026 28254592 ~ 28257603 (+)
LOC110501048 LOC106609163 coding downstream 74419 28311018 ~ 28335924 (+)
LOC110500183 LOC106609180 coding downstream 104824 28341423 ~ 28343734 (+)
utp20 utp20 coding downstream 115352 28351951 ~ 28376045 (+)
LOC110500185 LOC106609173 coding downstream 143223 28379822 ~ 28390596 (+)
G1722851 NA non-coding upstream 10704 28225460 ~ 28225680 (+)
G1722842 NA non-coding upstream 35648 28200506 ~ 28200736 (+)
G1722834 NA non-coding upstream 48760 28187260 ~ 28187624 (+)
G1722799 NA non-coding upstream 117004 28119015 ~ 28119380 (+)
G1722784 NA non-coding upstream 153820 28082270 ~ 28082564 (+)
G1722863 NA non-coding downstream 6691 28243290 ~ 28243497 (+)
G1723558 NA non-coding downstream 29994 28266593 ~ 28266992 (+)
G1723566 NA non-coding downstream 37772 28274371 ~ 28274634 (+)
G1723568 NA non-coding downstream 39713 28276312 ~ 28276674 (+)
G1722079 NA other upstream 1414449 26821647 ~ 26821935 (+)
cep83 LOC106609290 other upstream 1905291 26324744 ~ 26333964 (+)
G1721084 pfkfb3 other upstream 2194541 26038302 ~ 26041843 (+)
G1720853 NA other upstream 2599795 25636335 ~ 25636589 (+)
G1720836 NA other upstream 2624116 25611816 ~ 25612268 (+)
G1724234 LOC106609199 other downstream 976220 29209169 ~ 29214283 (+)
G1724262 LOC106609200 other downstream 1021661 29256778 ~ 29259929 (+)
G1725312 LOC106576088 other downstream 1653687 29890286 ~ 29891957 (+)

Expression


Co-expression Network